Gene VIBHAR_04928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04928 
Symbol 
ID5558226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp194224 
End bp194991 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID640909407 
Productarylmalonate decarboxylase 
Protein accessionYP_001447063 
Protein GI156976157 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGG GATCAGTAGC GCTACAGAAT GAACTGGATA ATCTTGCGAG TGCAGGTCGT 
GTGGGTGTTA TTTCGCTGGC GACAGACTTT AATATCGAGA ACGATTTACG CCAACTATTC
CCACAAGATG TCGCTTCATT TACCAGTCGG GTGCGCAACT ACAATCCGCT AACCATAGAG
AATCTGCGTC GTATGGAGCC TGGAATCCAA GAGGTGGCGG ATACGATTCT TCCTGGGACA
GCGCTAGATG TGGTTATCTA TGCGTGTACA TCGGGCACTA TTGCGATCGG AGAACAGCGC
ATTACCGACC TTATTCAGGC ACATCACCCT GATGCAAAAG TGACAAACCC AGTCACTGCA
GCTTTCGCTG CGTTTGAACG ATTGAACATA AAGCGCGTCT CCATTGTTAC GCCCTATACG
CAAGCAGTAA ACCAAGACGT GGCCGCCTTT TTCTCTACGG TAGGTATCGA AGTACTGAAC
ATCGTAGGCT TTGATTTTGA AGATGACACC GCGATGACGT TCATCTCGAC AAATGATATT
GCTCATGCGG CAATACAAGC TTGTCATCCC GATGCTGACG CCGTTTTCAT TTCTTGTACC
GCGCTGCGAG CGACCACGGT TATTCACGAT ATTGAAGCTG CAATAAACAA GCCAGTGTTA
TCCAGTAATC AAGTACTGGC TTGGCACGCT TTGGCACTTC TTAACTACCC CAAGCACATC
GAAGGTTTTG GTCTCCTTTT AGATCAGCAC TTGCCACTCA ACCTTTAA
 
Protein sequence
MEVGSVALQN ELDNLASAGR VGVISLATDF NIENDLRQLF PQDVASFTSR VRNYNPLTIE 
NLRRMEPGIQ EVADTILPGT ALDVVIYACT SGTIAIGEQR ITDLIQAHHP DAKVTNPVTA
AFAAFERLNI KRVSIVTPYT QAVNQDVAAF FSTVGIEVLN IVGFDFEDDT AMTFISTNDI
AHAAIQACHP DADAVFISCT ALRATTVIHD IEAAINKPVL SSNQVLAWHA LALLNYPKHI
EGFGLLLDQH LPLNL