Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04928 |
Symbol | |
ID | 5558226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 194224 |
End bp | 194991 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640909407 |
Product | arylmalonate decarboxylase |
Protein accession | YP_001447063 |
Protein GI | 156976157 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3473] Maleate cis-trans isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTGG GATCAGTAGC GCTACAGAAT GAACTGGATA ATCTTGCGAG TGCAGGTCGT GTGGGTGTTA TTTCGCTGGC GACAGACTTT AATATCGAGA ACGATTTACG CCAACTATTC CCACAAGATG TCGCTTCATT TACCAGTCGG GTGCGCAACT ACAATCCGCT AACCATAGAG AATCTGCGTC GTATGGAGCC TGGAATCCAA GAGGTGGCGG ATACGATTCT TCCTGGGACA GCGCTAGATG TGGTTATCTA TGCGTGTACA TCGGGCACTA TTGCGATCGG AGAACAGCGC ATTACCGACC TTATTCAGGC ACATCACCCT GATGCAAAAG TGACAAACCC AGTCACTGCA GCTTTCGCTG CGTTTGAACG ATTGAACATA AAGCGCGTCT CCATTGTTAC GCCCTATACG CAAGCAGTAA ACCAAGACGT GGCCGCCTTT TTCTCTACGG TAGGTATCGA AGTACTGAAC ATCGTAGGCT TTGATTTTGA AGATGACACC GCGATGACGT TCATCTCGAC AAATGATATT GCTCATGCGG CAATACAAGC TTGTCATCCC GATGCTGACG CCGTTTTCAT TTCTTGTACC GCGCTGCGAG CGACCACGGT TATTCACGAT ATTGAAGCTG CAATAAACAA GCCAGTGTTA TCCAGTAATC AAGTACTGGC TTGGCACGCT TTGGCACTTC TTAACTACCC CAAGCACATC GAAGGTTTTG GTCTCCTTTT AGATCAGCAC TTGCCACTCA ACCTTTAA
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Protein sequence | MEVGSVALQN ELDNLASAGR VGVISLATDF NIENDLRQLF PQDVASFTSR VRNYNPLTIE NLRRMEPGIQ EVADTILPGT ALDVVIYACT SGTIAIGEQR ITDLIQAHHP DAKVTNPVTA AFAAFERLNI KRVSIVTPYT QAVNQDVAAF FSTVGIEVLN IVGFDFEDDT AMTFISTNDI AHAAIQACHP DADAVFISCT ALRATTVIHD IEAAINKPVL SSNQVLAWHA LALLNYPKHI EGFGLLLDQH LPLNL
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