Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04824 |
Symbol | |
ID | 5556762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 87750 |
End bp | 89372 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909303 |
Product | glycosidease |
Protein accession | YP_001446960 |
Protein GI | 156976054 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAACG TACGATATAA AAAACTATTT GGCCAATCGC TTTTAGCCTT GAGTGTGGTT GGTGTTTTAT CCGCGTGTAA TTCCTCTGGT GGAAGCGATA ATGGCAGCAT GCCACTTCCT GATACAAGTT ATGCTTGCCA AGCGAATGTA ATGGAGCAAA GCAATCAGCT TCGCACTTAT CAAATCATGG TTGAGAGCTT TGTTGATGGC GATTCGAATA TCGGCCATGG CACAGGTTAC GGCACCAGCC ATCATAACGG TGATCTTCAA GGGATTATTG ATTCGCTTGA TTACATCCAA GACTTGGGCA TGAATGCGAT TTGGTTGACG CCAGTTTTTG AATCGGAAGC CATTGATGGG CAAGATCATT GGGCCGATCG TTTGGATGCG ACGGGCTACT TTGCCACGGA TTATTTTAAG ATTGATCCTC GCTTTGGCGA TTTGGAAACG GCGAGAACCT TAGTTGATGA AGCGCACAAA CGCGGCTTGT ATGTTTTCTT TGATGGCGTG TTTGGTCATC ACAAAGAAGG GTTGATTAAG CCGTCTCCAT CGGGTTTATT ACCTTCTGGT TCGAGCAACC CTGTTGACTA TCCAGCAAGC TTGGATTTCT ATAAAGAAGT CGCGACTTAC TGGGTCAAAG AGCTAAAAAT TGATGGTTGG CGTTTAGACC AAGCTTACCA AGTCCCAACC GACGCATGGA CACAAATCCG CAAAGCGGTG GATGAAGCCT CACAGAGTGT GACTTACACC AACGCGGAAG GTGATCAAGT GAATCCTCTG GGTTACATGG TGGCTGAGAT CTGGAAAGGC GAGTCAGAAA TCGCGAGTGA CGCATACGGC GCGGCTGACG ACCCTGCGCT GTGCTCGGCA TTTGATTTCC CAATGCGCTA TCGCGTGGTG GAAACACTGG CTGTCAATGA GAGTGGTGTC GGCGGTCGTG GTGTGGATTG GTTAGACAAT GGCTACCAAA CACACAACCA ATATCCGTCT CATGCTCAGC CAAACTTGAT GATTGGCAAT CACGATTTAG TTCGCTTTGG TGACTTGTTG CAACGAGGCG GATTAGCGGA TGTGAACGAT GCTGAATACT GGCAACGCCA CAAAGCCGCG TTTGCATTCC AAGCGGCTTA CACCGGCCCA ATCACTCTCT ATTATGGAGA TGAAATCGGT GACCAAGTTG ATGGTTTTGC AGCAAAAGAA GACAACAATA CGTGTGCGGT TCGTGGCGTT TGTGATGACC ATGTTGCCCG CAGCAGTGCC AAGATCGAAG GCGTAACTGC AACCCTAGAT GCCAACCAAG TTGATCTGAA AAACTACGTT AAGTCATTGA TGAATATGCG TGCTGAACAT CCTGCTTTGT ATCAAGGCAG CCGCACTAAC TTGGTAGCAA GTAATGGCAG CTATGTTGAC TTGAAAATAT CTGGCGATGA CCAAGTCTTA TTTGCTTTGA ATGCTTTTGA GAGTGCCCAC AATATTGTGC TGACAGAAGC ACAAATCGGG AGTAATCAAG CGCTGGTGGA TTTAATCACT AACCAACAAA TCACGCCAAG TAACGGGCAA TACCAGATCC CAATGTCATC ATTACAAGGG CGCTTCTTCA AAGTGACGCC AAACACTCAA TAA
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Protein sequence | MRNVRYKKLF GQSLLALSVV GVLSACNSSG GSDNGSMPLP DTSYACQANV MEQSNQLRTY QIMVESFVDG DSNIGHGTGY GTSHHNGDLQ GIIDSLDYIQ DLGMNAIWLT PVFESEAIDG QDHWADRLDA TGYFATDYFK IDPRFGDLET ARTLVDEAHK RGLYVFFDGV FGHHKEGLIK PSPSGLLPSG SSNPVDYPAS LDFYKEVATY WVKELKIDGW RLDQAYQVPT DAWTQIRKAV DEASQSVTYT NAEGDQVNPL GYMVAEIWKG ESEIASDAYG AADDPALCSA FDFPMRYRVV ETLAVNESGV GGRGVDWLDN GYQTHNQYPS HAQPNLMIGN HDLVRFGDLL QRGGLADVND AEYWQRHKAA FAFQAAYTGP ITLYYGDEIG DQVDGFAAKE DNNTCAVRGV CDDHVARSSA KIEGVTATLD ANQVDLKNYV KSLMNMRAEH PALYQGSRTN LVASNGSYVD LKISGDDQVL FALNAFESAH NIVLTEAQIG SNQALVDLIT NQQITPSNGQ YQIPMSSLQG RFFKVTPNTQ
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