Gene VIBHAR_04824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04824 
Symbol 
ID5556762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp87750 
End bp89372 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content47% 
IMG OID640909303 
Productglycosidease 
Protein accessionYP_001446960 
Protein GI156976054 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAACG TACGATATAA AAAACTATTT GGCCAATCGC TTTTAGCCTT GAGTGTGGTT 
GGTGTTTTAT CCGCGTGTAA TTCCTCTGGT GGAAGCGATA ATGGCAGCAT GCCACTTCCT
GATACAAGTT ATGCTTGCCA AGCGAATGTA ATGGAGCAAA GCAATCAGCT TCGCACTTAT
CAAATCATGG TTGAGAGCTT TGTTGATGGC GATTCGAATA TCGGCCATGG CACAGGTTAC
GGCACCAGCC ATCATAACGG TGATCTTCAA GGGATTATTG ATTCGCTTGA TTACATCCAA
GACTTGGGCA TGAATGCGAT TTGGTTGACG CCAGTTTTTG AATCGGAAGC CATTGATGGG
CAAGATCATT GGGCCGATCG TTTGGATGCG ACGGGCTACT TTGCCACGGA TTATTTTAAG
ATTGATCCTC GCTTTGGCGA TTTGGAAACG GCGAGAACCT TAGTTGATGA AGCGCACAAA
CGCGGCTTGT ATGTTTTCTT TGATGGCGTG TTTGGTCATC ACAAAGAAGG GTTGATTAAG
CCGTCTCCAT CGGGTTTATT ACCTTCTGGT TCGAGCAACC CTGTTGACTA TCCAGCAAGC
TTGGATTTCT ATAAAGAAGT CGCGACTTAC TGGGTCAAAG AGCTAAAAAT TGATGGTTGG
CGTTTAGACC AAGCTTACCA AGTCCCAACC GACGCATGGA CACAAATCCG CAAAGCGGTG
GATGAAGCCT CACAGAGTGT GACTTACACC AACGCGGAAG GTGATCAAGT GAATCCTCTG
GGTTACATGG TGGCTGAGAT CTGGAAAGGC GAGTCAGAAA TCGCGAGTGA CGCATACGGC
GCGGCTGACG ACCCTGCGCT GTGCTCGGCA TTTGATTTCC CAATGCGCTA TCGCGTGGTG
GAAACACTGG CTGTCAATGA GAGTGGTGTC GGCGGTCGTG GTGTGGATTG GTTAGACAAT
GGCTACCAAA CACACAACCA ATATCCGTCT CATGCTCAGC CAAACTTGAT GATTGGCAAT
CACGATTTAG TTCGCTTTGG TGACTTGTTG CAACGAGGCG GATTAGCGGA TGTGAACGAT
GCTGAATACT GGCAACGCCA CAAAGCCGCG TTTGCATTCC AAGCGGCTTA CACCGGCCCA
ATCACTCTCT ATTATGGAGA TGAAATCGGT GACCAAGTTG ATGGTTTTGC AGCAAAAGAA
GACAACAATA CGTGTGCGGT TCGTGGCGTT TGTGATGACC ATGTTGCCCG CAGCAGTGCC
AAGATCGAAG GCGTAACTGC AACCCTAGAT GCCAACCAAG TTGATCTGAA AAACTACGTT
AAGTCATTGA TGAATATGCG TGCTGAACAT CCTGCTTTGT ATCAAGGCAG CCGCACTAAC
TTGGTAGCAA GTAATGGCAG CTATGTTGAC TTGAAAATAT CTGGCGATGA CCAAGTCTTA
TTTGCTTTGA ATGCTTTTGA GAGTGCCCAC AATATTGTGC TGACAGAAGC ACAAATCGGG
AGTAATCAAG CGCTGGTGGA TTTAATCACT AACCAACAAA TCACGCCAAG TAACGGGCAA
TACCAGATCC CAATGTCATC ATTACAAGGG CGCTTCTTCA AAGTGACGCC AAACACTCAA
TAA
 
Protein sequence
MRNVRYKKLF GQSLLALSVV GVLSACNSSG GSDNGSMPLP DTSYACQANV MEQSNQLRTY 
QIMVESFVDG DSNIGHGTGY GTSHHNGDLQ GIIDSLDYIQ DLGMNAIWLT PVFESEAIDG
QDHWADRLDA TGYFATDYFK IDPRFGDLET ARTLVDEAHK RGLYVFFDGV FGHHKEGLIK
PSPSGLLPSG SSNPVDYPAS LDFYKEVATY WVKELKIDGW RLDQAYQVPT DAWTQIRKAV
DEASQSVTYT NAEGDQVNPL GYMVAEIWKG ESEIASDAYG AADDPALCSA FDFPMRYRVV
ETLAVNESGV GGRGVDWLDN GYQTHNQYPS HAQPNLMIGN HDLVRFGDLL QRGGLADVND
AEYWQRHKAA FAFQAAYTGP ITLYYGDEIG DQVDGFAAKE DNNTCAVRGV CDDHVARSSA
KIEGVTATLD ANQVDLKNYV KSLMNMRAEH PALYQGSRTN LVASNGSYVD LKISGDDQVL
FALNAFESAH NIVLTEAQIG SNQALVDLIT NQQITPSNGQ YQIPMSSLQG RFFKVTPNTQ