Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04772 |
Symbol | |
ID | 5557112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 39540 |
End bp | 40274 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640909251 |
Product | putative transport protein of outer membrane lipoproteins |
Protein accession | YP_001446908 |
Protein GI | 156976002 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGCC CACTTGTCAC ACTCAAACAC GCCAGTAAAA GCTTTGTCGA TGGCAAAGAG ACACATCACG TGTTGGAAGG GGTCGACTTT ACGTTGAACA CAGGAGCGAG TGTTGCACTG ACGGGCGCCA GTGGTAGCGG CAAAAGTACC TTACTCAATG TCATCGCTGG CTTTGAGCCA CTTTCCGATG GTGAGTTGTG GTTAGATGGC GATAACACGG CGGCTTGGAA AGACCCACAA TGGAGCCGAT TTCGACACCA AAAACTCGGC GTTATTTTTC AGCAATTCAA CCTATTAACG CCTCTTAACG TGAAGCAAAA CATCGCCTTT CCTCTGCATT TGAATCAACA GAAATGGGAT AACTGGTGCG ATTACCTGGT CGAAACGCTG GGCATCAGCC AACTTCTCGA CAGGCATGTT TCTGCTCTTT CAGGCGGTCA ACAACAACGC GTCGCTATTG CCCGTGCACT TGCCCACAAA CCCAAACTTC TGCTTGCCGA TGAGCCCACA GGCAACCTCG ACCAAAAAGC AGGCTTAGAA GTGATGAAAC TGCTCAGTGA AATCACCAGC CAAGGCAATA CCGCGGTGCT CTTGGTGACC CACAGCCCTG AGTGTGCCGA GTTTATGCAA ACCCCGTTAC GCTTGAAAGA TGGGCGTTTA AAGGACGGTC GTTTGCAAAA CGGACTGACG CAAAATCAGC GCGATGTAAA TGAGCAACAT CATGAAGCAA GCTAA
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Protein sequence | MESPLVTLKH ASKSFVDGKE THHVLEGVDF TLNTGASVAL TGASGSGKST LLNVIAGFEP LSDGELWLDG DNTAAWKDPQ WSRFRHQKLG VIFQQFNLLT PLNVKQNIAF PLHLNQQKWD NWCDYLVETL GISQLLDRHV SALSGGQQQR VAIARALAHK PKLLLADEPT GNLDQKAGLE VMKLLSEITS QGNTAVLLVT HSPECAEFMQ TPLRLKDGRL KDGRLQNGLT QNQRDVNEQH HEAS
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