| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04729 |
|---|
| Symbol | |
|---|
| ID | 5558208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 4288 |
|---|
| End bp | 5217 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640909208 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446865 |
|---|
| Protein GI | 156975959 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5464] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAG TGAAAACCCC AACATCGATA CATGACGGAT TGTTTAAGTC GTTCTTGACT
GTTCCAGAAA CCACGAAGGA CTTTCTTGAT GTGCACTTAC CAGAGCACAT CAAACAGATG
TGCAATCTCG ATACGCTCCA ACTTCAATCC GGTTCATTTT TGGAAGATGA ATTAGTAGCC
TATTATTCCG ATGTGCTGTA TTCAATGGAA ACGGACAGTG GAGTAGGGTA TGTGTACGCT
TTGGTTGAGC ACCAAAGTAG TCCTGATAAA CATATGGGCT TTAGATTGAT GCGATACGCA
ATCGCGGCAA TGAAACAGCA TCTAGACGCA GGTAACGAAA CATTGCCTTT GGTTGTGCCG
TTGCTGTTCT ATCATGGGAA AACGAGTCCT TATCCATACA GTACAAATTG GTTGGATGAA
TTTGAAAATC CAGAGATAGC TCAAACCCTT TATGCTCAGT CTTTCCCTTT GGTGGATGTC
ACTGTGATAC CGGATGATGA AATCATCCGG CATAAACGAG TGGCCTTGTT AGAGCTGGTA
CAGAAGCATG TGCGGCAAAG AGATTTGTTG GATTTTACAG ACACACTGGT TACACTGTTA
TTAGAGCGTT TAATAACCAG CAAACAGTTA GATAGTTTAG TGGAGTATTT GCTTAGAGTA
GGGGAAACGT CGAATCTAGA AGATTTGATG CGAACTTTAG CTAGGCAAGT GCCAGAGCAT
GAGGAACGGT TCATGACAGT AGCAGAGCAA TTGGAAGCGC GTGGCCGCGA GCAAGGTCTA
CAGCAAGGTA GACAAGAAGG CGAACAACAA GGTTGGCAAG AAGCCCAATT GAGCATTGCA
AAAAAAATGC TTTCAGCAGG AATTGATATA GCTCTTATCG CGCAAACAAC AGAGCTAACC
GAAGATGAGA TCTCAAGACT CATCAACTAA
|
|---|
| Protein sequence | MNRVKTPTSI HDGLFKSFLT VPETTKDFLD VHLPEHIKQM CNLDTLQLQS GSFLEDELVA
YYSDVLYSME TDSGVGYVYA LVEHQSSPDK HMGFRLMRYA IAAMKQHLDA GNETLPLVVP
LLFYHGKTSP YPYSTNWLDE FENPEIAQTL YAQSFPLVDV TVIPDDEIIR HKRVALLELV
QKHVRQRDLL DFTDTLVTLL LERLITSKQL DSLVEYLLRV GETSNLEDLM RTLARQVPEH
EERFMTVAEQ LEARGREQGL QQGRQEGEQQ GWQEAQLSIA KKMLSAGIDI ALIAQTTELT
EDEISRLIN
|
|---|
| |