Gene VIBHAR_03519 details

Gene Information

• Locus tag: VIBHAR_03519
• Symbol: pcm
• ID: 5553122
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 3568752
• End bp: 3569378
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640908999
• Product: protein-L-isoaspartate O-methyltransferase
• Protein accession: YP_001446682
• Protein GI: 156975775
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2518] Protein-L-isoaspartate carboxylmethyltransferase
• TIGRFAM ID: [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAACC CACATGCTGA CAGGTTGATA GCATTTCTTA TCTCCAGTGG CATCAGTGAT 
CAACGAGTGT TGGATGCGAT TTATCGACTG CCACGTGAGA GCTTTGTCTC ACAAGCAATG 
ATGCACCAAG CGTACGACAA CAATGCGTTG CCGATTGGTC AGGGGCAAAC CATTTCTCAG 
CCTTACATCG TTGCAAAAAT GACAGAGCTG CTCGATTTGA AATCGGACAG CAATGTTTTA 
GAGATTGGCA CGGGCTCGGG CTACCAAACA GCAGTCCTTG CTCAAATTGT TGATCATGTC 
TATTCAGTTG AACGCATTAA GTCTCTGCAA TGGGATGCTA AGCGTCGTCT GAAACAACTG 
GATATCTATA ACGTCTCTAC TAAACACGGA GATGGTTGGC TCGGATGGGA AGCGAAAGGC 
CCGTTCGATG CGATTATCGT CACTGCGGCT GCGGAAAGTG TTCCCCAAGC ACTTTTATCC 
CAGCTGAAAG AGGGCGGTAA GATGATCATT CCTGTTGGTG AAGAAGAGCA ACAACTATTA 
AAAATTGAAC GTCAGGGTGA ACAATATCTG TCGACCGTGG TAGAAATGGT AAGATTTGTG 
CCATTAGTTG CAGGTGATTT AGCTTAA 

 

Protein sequence

MTNPHADRLI AFLISSGISD QRVLDAIYRL PRESFVSQAM MHQAYDNNAL PIGQGQTISQ 
PYIVAKMTEL LDLKSDSNVL EIGTGSGYQT AVLAQIVDHV YSVERIKSLQ WDAKRRLKQL 
DIYNVSTKHG DGWLGWEAKG PFDAIIVTAA AESVPQALLS QLKEGGKMII PVGEEEQQLL 
KIERQGEQYL STVVEMVRFV PLVAGDLA