Gene VIBHAR_03427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03427 
Symbol 
ID5553805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3470526 
End bp3471521 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content48% 
IMG OID640908907 
Producthypothetical protein 
Protein accessionYP_001446599 
Protein GI156975692 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAC AATTCGGCGA ACTGCTGATT GAAGGTAAAA ATGTCGTTAA GGACTTCCCT 
TTAAACAGTA ACTCAATCAA GCAATCTAAG ATGCGTGCAA TCAACGACGT ATCTTTCAAA 
ATGTACAAAA GCCGCGGTTT GTCAGTAGTA GGTGAATCTG GTTCAGGTAA ATCTACTACC 
GCAAAAATGA TTGCGAAAAT GTACGCACCA ACGGATGGCA TCATCGAATA CAAAGGTCGT 
GATATCCAAG ACATCACCTC TCGTCACGAT TTGATGACTT ACCGCGAAGG CGTGCAAATG 
GTATGGCAAG ACCCGTTTGG CTCGCTAAAC CCAACACACA ACATCTTCCA CCATATTGCT 
CGCCCACTGT TGATCCACAA GAAGGTTTCA CCGGGCAACA AGAAGGAACT GGAAGAGCGA 
GTGTACGACC TACTAGAACA AGTTGGCCTG ATTCCGCCAA AAGAGACCGC ACAAAAGTTC 
CCACACCAGC TTTCTGGTGG TCAGCGCCAA CGTGTGAACT TGGCTCGTAA CATTGCGGTC 
GGCGCAGAAG TGGTACTGGC TGACGAACCA ACGTCAATGC TCGACGTTTC AATTCGTGCC 
GGTGTTCTTA ACCTGATGGA AGAGATGAAG TTTGAGAAGC AAATGTCTCT GCTTTATATC 
ACTCACGACA TCGCAACAGC GCGCTACATC GCTGAAGATC TCGCAGTTAT GTACGTGGGC 
CACATGGTTG AATGGGGTGA TACAGAGGAA ATCATTCATG ATCCTCAACA CCCGTACACG 
CAGCTACTGG TTTCAGCAGT GCCAGATCCA TCGAAGTCAA TCCACGAGAA ACTGAAAGGC 
AACAAAGGTG AGATCCCACT GTGGACACCA GAATCCGTGG GCTGTCCATT CGCTGGGCGC 
TGTGTTCATG CCACAGAAAA ATGTCGCGAG CGACTGCCTG GTGTGACGCA ACTGTCCGAT 
AACCACTTTG TTCGTTGTTA CTTATTCGAA GATTAA
 
Protein sequence
MSKQFGELLI EGKNVVKDFP LNSNSIKQSK MRAINDVSFK MYKSRGLSVV GESGSGKSTT 
AKMIAKMYAP TDGIIEYKGR DIQDITSRHD LMTYREGVQM VWQDPFGSLN PTHNIFHHIA 
RPLLIHKKVS PGNKKELEER VYDLLEQVGL IPPKETAQKF PHQLSGGQRQ RVNLARNIAV 
GAEVVLADEP TSMLDVSIRA GVLNLMEEMK FEKQMSLLYI THDIATARYI AEDLAVMYVG 
HMVEWGDTEE IIHDPQHPYT QLLVSAVPDP SKSIHEKLKG NKGEIPLWTP ESVGCPFAGR 
CVHATEKCRE RLPGVTQLSD NHFVRCYLFE D