Gene VIBHAR_03426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03426 
Symbol 
ID5553511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3469494 
End bp3470477 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content48% 
IMG OID640908906 
Producthypothetical protein 
Protein accessionYP_001446598 
Protein GI156975691 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAC CACTAATTTC TATCCGTAAC CTATGCGTGG ACTACATTAC AGATGCGGGC 
GATGTCCGCG CCTGTAACAA CGTCAGCTTC GACATTGCAC CAGGCGAAGT ATTTGGCCTA 
GCTGGTGAAT CTGGCTGTGG TAAATCAACC GTTGCATTCT CGCTAATGCG CCTTCATAAG 
CCGCCAGCGT TTATCACAGG TGGTGAGGTT ATTTTCAACG GCGAAGATAT CCTTCAATAC 
AGCGATGAGC GTATGCAGTC GTTCCGCTGG AGCGAAATGT CGATGGTATT CCAAAGTGCG 
ATGAACGCTT TGAACCCTGT ACTGACGATG GAAGAGCAGT TCTGTGACGT AATCATGCGC 
CACACCAACA TGACTCGCGC TCAAGCCAAA GTACGTGCAG AAGGTCTATT GGAAATCGTA 
GATATCCACC CTAGCCGTCT GAGCGATTAC CCGCACCAGT TCTCTGGTGG TATGCGTCAG 
CGTCTAGTTA TCGCTATCGC TTTGGCTCTG AACCCGAAAA TGATCATCAT GGATGAACCT 
ACTACAGCAC TAGACGTGGT GGTTCAACGT GAAATTCTGC AAAAGATTTA CGCGCTTAAA 
GAAGAATTTG GCTTCTCGAT TCTGTTCATC ACCCATGACT TGTCATTGAT GGTCGAGTTC 
TCTGACCGCA TCGGCATCAT GTACTCGGGT GAGCTAATTG AAGTTGCACC TTCTAAGCAA 
ATTTTGGAAA GTCCTTACCA CCCTTACACA AAAGGTTTGG GTAGCTCTTT CCCTCCACTA 
ACTGGTCCTA AGACCAAATT AACTGGTATT CCGGGCAACC CTCTGAACTT ACTAGAAGTT 
CCACAAGGTT GCCGCTTCCA AGCTCGCTGT GACCGCGTTC ACGAAGCTTG TACACGAGTA 
CCGACTCAGC TACGTCAAAT TGAACCTGGT CGTCTCTCAA ACTGCCACTT GTACGGCGAC 
ACCATTGCTC AAGCTAAGGT TTAA
 
Protein sequence
MTAPLISIRN LCVDYITDAG DVRACNNVSF DIAPGEVFGL AGESGCGKST VAFSLMRLHK 
PPAFITGGEV IFNGEDILQY SDERMQSFRW SEMSMVFQSA MNALNPVLTM EEQFCDVIMR 
HTNMTRAQAK VRAEGLLEIV DIHPSRLSDY PHQFSGGMRQ RLVIAIALAL NPKMIIMDEP 
TTALDVVVQR EILQKIYALK EEFGFSILFI THDLSLMVEF SDRIGIMYSG ELIEVAPSKQ 
ILESPYHPYT KGLGSSFPPL TGPKTKLTGI PGNPLNLLEV PQGCRFQARC DRVHEACTRV 
PTQLRQIEPG RLSNCHLYGD TIAQAKV