Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03414 |
Symbol | |
ID | 5553640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3452385 |
End bp | 3455519 |
Gene Length | 3135 bp |
Protein Length | 1044 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908894 |
Product | hypothetical protein |
Protein accession | YP_001446586 |
Protein GI | 156975679 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCTT TGATTGATGC TGCGTTATCG CGTGCACGTA CGATGCTCAC CTTGTTGGTG ATGATTTTGA TTGCTGGTGT GATCACCTAC ATTACGATTC CTAAAGAATC GAGTCCAGAC ATCACCATCC CTATTATCTA TGTTTCGGTA GGGCACCAAG GTATTTCGCC AACTGATGCG GAGCGCTTAT TAGTTCGCCC AATAGAGCAA GAGCTGCGTT CGATTGAAGG CGTAAAAGAA ATGACCGCGG TTGCTTCAGA GGGCCATGCT TCGGTGACGC TTGAGTTCAG TGTCGGTGTT GATCTGGCGG AAGCGATGGC GGATGTGCGT GACGCCGTCG ATCTAGCCAA ACCTAAATTG CCTGAAGACA GTGATGAGCC AACAGTTAAT GAGGTGACGT TCGCATCAGA AGAGCCTGTC CTTACTTTGG TTCTGTATGG CACCGTCCCT GAGCGCACAA CAGTACAAAT TGCTCGTGCA CTGCGTGACA AGCTAGAAAG CTACCGTCAG GTGCTTGAAG TTGATATTGC CGGTGATCGT GAAGACATTG TTGAGATCAT CGTCGATCCG CTGTTGATGG AAAGCTATGG TCTGGATCAA GCAGACATCT ACAACTTGAT TGCTCTCAAT AACCGAGTTG TGGCAGCGGG TTTCGTGGAT ACTGGCTATG GCCGTTTTTC AGTCAAAGTT CCTTCCGTAT TTGATTCTCT CAAAGACGTA TTAGAGTTAC CGATTAAGGT GAACGGCAAA GAAGTGATTA CTTTTGGCGA TGTGGCGACC GTGCGCCGGG CCTTCCGTGA CCCTGAAAGT TTTGCTCGTT TGGATGGTGA CCCTGCTGTC GTATTGAATG TGAAAAAGCG TGCTGGCGAG AACATTATTG AAACGGTGGA ACTCGTTAAA CAGGTTCTGA CTGAAGCGCA AAAGCGAGCG GATTGGCCAA ACAACTTGCA GGTCAAATAT ACGTGGGATC AGTCTGATGA CGTCAAACTG ATGCTCAACG ATCTGCAAAA CAACATTCTC TCTGCCATCA TTCTTGTCGT CATTGTTATC ATCGCGATAC TTGGTGTGCG AACCGCTCTC TTAGTGGGTA TCTCTATTCC AGGCTCATTC CTTACCGGCT TATTAGTGCT TTCGGTGTTT GGCTTAACGG TCAACATTGT GGTGCTATTC GCGCTGATCA TGGCTGTAGG TATGCTGGTG GATGGCGCTA TCGTGGTGAC CGAATTTGCT GATAGGCGGA TGCAAGAAGG CACGCCACGC AAAGAAGCGT ATCGGGACGC GGCAAAACGA ATGGCGTGGC CTATTACCGC CTCGACGGCA ACGACCCTTG CTGCGTTTGC TCCGCTATTG TTCTGGCCGG ATATTACTGG CGAGTTCATG AAGTATCTGC CGCTAACATT GATCGCAACG CTTACCGCTT CGTTGATGAT GGCGCTGCTT TTTGTTCCGG TTATTGGTGG GATTATTGGT AAGCCACAAG TGGTTAACCC TAAAAGCCAG CAAGAGATGA TTGATCTTCA TAATGGCGAG TTTGATAAGG CTACTGGTAT TACCAAGCTC TACTATCAAA CGCTCTCGGT CGCTATCAAG CATCCACTTA AAGTTCTGTT CAGTGCCATA CTACTCGCTG GTGGTGTCGG CTTTACTTAT AACAAAGCGG GACTAGGGGC AGAGTTCTTC CCAGAAGTGG ACCCCGCTTT CTTTACCGTC AAGGTGCGTT CTTACGGCGA TTTATCGATC AACGAAAAAG ATGTCGTGAT GAAAGAGATT GAAAAAGTCA TGTTAGGGCA TGATGAATTT GAGAGTGTCT ATACGCGCAC CGGAACGGAT TCAAATGATG GTGATGAGAT TGGCCAGATT CAAATAACGC CCGTCGATTG GCAATATCGT CGCAAAGTGA AAGACATCAT TGAAGAACTC AAACAAACCA CTAACCAATT CTCGGGTGTT GAGCTGGAGT ACAAGTTTCC CGATGCAGGG CCACCGGTTG AACACGATCT TGTGATTGAA ATGTCGGCGC AAAACTCAAG CATTGACCAG TTAGACAGTG CAGCCAAAAT GGTTCGTTAC TGGGCTGATC GTAATCCTGC TTTAACTAAC CTAAGTGATA CAACCAATAA AGAAGGGATT GATTGGCAGA TTGATATCCG CAGAGACGAT GCCTCTCGCT TTGCTGCTGA TGCAACTCTG GTTGGTAATA CTGTCCAGTT CGTGACTAAC GGTTTGAAGA TAGGTGATTA TCTACCCGAT GATGCTGATG AAGAAGTCGA TATCTTAGTG CGCTACCCAC AAGATAAGCG GGATATCGGA CGTTTTGACC AGTTACGTGT AAAAACGGCG GCAGGTTTAG TGCCGATCAC AAACTTTGCG CAGATTAAAC CAGATCATAA GCAAGATACG ATTCGCCGTG TTGATGGTCG TCGTGTAGTG AACATAAAAG CCGATATGGT TGAGGGTTAT AACCTTGCCC TTGAATTGCC CAAGATAACT GCAGAAGTTG AGCAGTTGGG CTTGCCTGTT GGTATTGAGT TTAAAATTCG CGGGCAAAAC GAGGAGCAAG AAAACTCTTC TGCGTTTTTA CAAAGTGCTT TCATGGTTGC ACTTGGCGTG ATGGCTTTGA TCCTGATTAC TCAATTCAAC AGCTTCTACC AAGCATTTTT GATTTTAAGC GCAGTGCTGT TTTCTACCAT TGGCGTGTTT GCTGGCTTGC TTATTTTCCA GAAGCCTTTC GGTATTATTA TGTCGGGTAT TGGGGTGATC GCATTAGCTG GTATTGTGGT GAACAACAAT ATCGTATTAA TTGATACCTA TAACCAAATG CGCAAGCGTG GGTTAGAAAA ATCAGACGCA ATTCTACGTA CGGGCGTACA GCGCCTGCGT CCAGTGTTAC TGACCACTGT CACGACTATC CTTGGCTTAC TGCCAATGGT GCTAGAGATG AACATCGACT TAGTTAACCA GAAGATTGAA TTTGGTGCGC CAAGCACGCA GTGGTGGTCT CAATTGGCTA CGGCCGTCGC GGGTGGTTTA GCTTTTGCGA CGGTGCTGAC CTTGGTGCTG ACACCGTGTC TTTTGATGCT TGGCCGTGAA CACAATATTG ATGAACCAGA CCCCGAAACA AAAGAGGCAG CTTAG
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Protein sequence | MFALIDAALS RARTMLTLLV MILIAGVITY ITIPKESSPD ITIPIIYVSV GHQGISPTDA ERLLVRPIEQ ELRSIEGVKE MTAVASEGHA SVTLEFSVGV DLAEAMADVR DAVDLAKPKL PEDSDEPTVN EVTFASEEPV LTLVLYGTVP ERTTVQIARA LRDKLESYRQ VLEVDIAGDR EDIVEIIVDP LLMESYGLDQ ADIYNLIALN NRVVAAGFVD TGYGRFSVKV PSVFDSLKDV LELPIKVNGK EVITFGDVAT VRRAFRDPES FARLDGDPAV VLNVKKRAGE NIIETVELVK QVLTEAQKRA DWPNNLQVKY TWDQSDDVKL MLNDLQNNIL SAIILVVIVI IAILGVRTAL LVGISIPGSF LTGLLVLSVF GLTVNIVVLF ALIMAVGMLV DGAIVVTEFA DRRMQEGTPR KEAYRDAAKR MAWPITASTA TTLAAFAPLL FWPDITGEFM KYLPLTLIAT LTASLMMALL FVPVIGGIIG KPQVVNPKSQ QEMIDLHNGE FDKATGITKL YYQTLSVAIK HPLKVLFSAI LLAGGVGFTY NKAGLGAEFF PEVDPAFFTV KVRSYGDLSI NEKDVVMKEI EKVMLGHDEF ESVYTRTGTD SNDGDEIGQI QITPVDWQYR RKVKDIIEEL KQTTNQFSGV ELEYKFPDAG PPVEHDLVIE MSAQNSSIDQ LDSAAKMVRY WADRNPALTN LSDTTNKEGI DWQIDIRRDD ASRFAADATL VGNTVQFVTN GLKIGDYLPD DADEEVDILV RYPQDKRDIG RFDQLRVKTA AGLVPITNFA QIKPDHKQDT IRRVDGRRVV NIKADMVEGY NLALELPKIT AEVEQLGLPV GIEFKIRGQN EEQENSSAFL QSAFMVALGV MALILITQFN SFYQAFLILS AVLFSTIGVF AGLLIFQKPF GIIMSGIGVI ALAGIVVNNN IVLIDTYNQM RKRGLEKSDA ILRTGVQRLR PVLLTTVTTI LGLLPMVLEM NIDLVNQKIE FGAPSTQWWS QLATAVAGGL AFATVLTLVL TPCLLMLGRE HNIDEPDPET KEAA
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