| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03381 |
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| Symbol | prfC |
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| ID | 5553185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3417547 |
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| End bp | 3419136 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640908861 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001446555 |
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| Protein GI | 156975648 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATC CCCTTTTTTT AGGCGAAGTT TCTAAGCGCA GAACGTTCGC TATTATTTCT
CACCCGGATG CGGGTAAAAC CACCATTACT GAAAAAGTAC TGTTATTCGG AAACGCGATC
CAAAAAGCAG GTACGGTTAA AGGTCGTGGT AACGCACAGC ACGCAAAATC AGACTGGATG
GAAATGGAAA AGGAACGTGG TATCTCGGTT ACTACTTCTG TAATGCAGTT CCCTTACAAC
GATTGTCTGG TAAACCTACT TGATACTCCT GGACACGAAG ACTTCTCGGA AGATACTTAC
CGTACTCTAA CGGCGGTTGA CTCATGTCTA ATGGTTATCG ATGCGGCGAA AGGTGTCGAG
GATCGTACTC GTAAGCTGAT GGAAGTAACG CGTCTGCGTG ACACGCCAAT CGTAACCTTC
ATGAACAAAC TTGACCGTGA CGTTCGTGAT CCAATGGAAG TATTGGATGA GGTAGAAAAC
GAACTTGGCA TGATGTGTGC GCCAATTACG TGGCCAATCG GCTGTGGTAA AGAGTTTAAA
GGTGTTTACC ATATTCACCG TGACGAAACG ATTCTGTACG AATCTGGCCA CGGTCACGAG
ATCCAAGAAG TTCGCATCAT CAAAGGTCTA GACAACCCTG AACTTGATGA GAAAGTAGGT
GAAAGCCTAG CCGCAAGCGT TCGTGAAGAG CTTGAGCTTG TTATGGGCGC TTGCCCTGAG
TTTGATCACG AAGCATTCCT TGTTGGTGAA CTAACGCCAG TTTACTTCGG TACAGCACTA
GGTAACTTTG GTGTTGACCA CATGCTAGAT GGCTTAACTG AGTGGGCGCC AGCGCCGAAA
ACTCGTCAAG CGGTAGAGCG TGATGTGGAA GCGACAGAAG ACAAGTTCTC AGGCTTCGTA
TTTAAGATCC AAGCAAACAT GGATCCAAAA CACCGTGACC GTATCGCCTT CATGCGTATC
GTATCGGGTA CTTACACACA AGGTATGAAG ATGAACCACG TTCGTCTTGG CAAGCAAGTA
AGTATCTCAG ATGCGGTTAC CTTTATGGCG GGTGACCGTT CTCGTGCAGA GCACGCTTAC
GCGGGTGACA TCATTGGTCT ACACAACCAC GGTACTATCC AAATTGGTGA TACATTCACT
CAAGGTGAAG CGCTGAAGTT CTCTGGTATT CCAAACTTTG CGCCAGAACT GTTCCGTCGT
ATTCGTCTAA AAGATCCATT GAAGCAGAAG CAGCTGCTGA AAGGTCTGGT TCAGCTTTCT
GAAGAAGGTG CAGTACAGGT ATTCCGTCCA TTGCAAAACA ACGACCTGAT CGTAGGTGCG
GTTGGTGTGC TTCAGTTTGA CGTGGTTGTG GCTCGCTTGA AGTCAGAATA CAACGTTGAA
GCGATTTACG AAGGCGTAAA CGTAGCAACC GCTCGTTGGG TTGAGTGTGG TGATGCGAAG
AAACTGGACG AGTTCCAACG TAAGAACCAA ACTAACCTAG CATTGGACGG TGGTGATAAC
CTAACGTACA TCGCGCCAAC TATGGTTAAC CTAAACCTAG CGCAAGAGCG TTTCCCAGAT
ATCGATTTCC GTGCGACTCG TGAGCACTAA
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| Protein sequence | MSNPLFLGEV SKRRTFAIIS HPDAGKTTIT EKVLLFGNAI QKAGTVKGRG NAQHAKSDWM
EMEKERGISV TTSVMQFPYN DCLVNLLDTP GHEDFSEDTY RTLTAVDSCL MVIDAAKGVE
DRTRKLMEVT RLRDTPIVTF MNKLDRDVRD PMEVLDEVEN ELGMMCAPIT WPIGCGKEFK
GVYHIHRDET ILYESGHGHE IQEVRIIKGL DNPELDEKVG ESLAASVREE LELVMGACPE
FDHEAFLVGE LTPVYFGTAL GNFGVDHMLD GLTEWAPAPK TRQAVERDVE ATEDKFSGFV
FKIQANMDPK HRDRIAFMRI VSGTYTQGMK MNHVRLGKQV SISDAVTFMA GDRSRAEHAY
AGDIIGLHNH GTIQIGDTFT QGEALKFSGI PNFAPELFRR IRLKDPLKQK QLLKGLVQLS
EEGAVQVFRP LQNNDLIVGA VGVLQFDVVV ARLKSEYNVE AIYEGVNVAT ARWVECGDAK
KLDEFQRKNQ TNLALDGGDN LTYIAPTMVN LNLAQERFPD IDFRATREH
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