| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03346 |
|---|
| Symbol | |
|---|
| ID | 5553115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3381599 |
|---|
| End bp | 3382297 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640908826 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446520 |
|---|
| Protein GI | 156975613 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGG CGACTTTTTT GAGTATTCCA CTACTTTTGC TGTTTGGTTG CTCTTCCACA
ATAGAGAGTG AAGAGAGTTT GGTGCAAAAC ATGGAGCGTG TTGATAACCA TACAGGTCTG
ATTAATCACT ATAAAGGGCA TCTAGAAAAG CGACCTGAAG ACGTCCAGAT CATGCAGGAA
TTGGCAAAAG TGTATTTTGA TAAGGGCGAT ATCGAGTCGG CTAAGTTTTA TGCTGACCAT
TTGCTCAATC AAGGGGTGAA GAATAGTGAG CTCCTTCAAT TAAGAGGTCA GATTCATAGC
CAAGATGGTG AAGATTCTTT GGCTCTAAAA CGCTATAAAA GCTCGATAGA AATGGGCAAC
AAAAGCGGAG AAATCTATGT TTTATCGGGC ATCTCCTATT GTAATACCAA CCAATTCTCT
CAAGCAAAAA ATGCGTTTAA TCAAGCTCGT CTCAAAGGCT ATAACGACGT GGCGGTGAAA
AACAATTTAG CCGTAGTTTA TCTTGCACAA CGACAGTATG ACGACGTGAT ATCGCTATTG
GTTCCTGTTT ATCAAGAGAA CCCAAGTAAC CAGAAAGTGC GAGCGAATTT GGCGATCGCG
CTGTTCAAAG TGGGGGATGT CTATCAAGCG AGAGATCTAC TTGAAGGAAC ATTTACCAAT
GCTCAAGTAG AGCAAATCTC AAGGGAGTTA CACCGGTAA
|
|---|
| Protein sequence | MNKATFLSIP LLLLFGCSST IESEESLVQN MERVDNHTGL INHYKGHLEK RPEDVQIMQE
LAKVYFDKGD IESAKFYADH LLNQGVKNSE LLQLRGQIHS QDGEDSLALK RYKSSIEMGN
KSGEIYVLSG ISYCNTNQFS QAKNAFNQAR LKGYNDVAVK NNLAVVYLAQ RQYDDVISLL
VPVYQENPSN QKVRANLAIA LFKVGDVYQA RDLLEGTFTN AQVEQISREL HR
|
|---|
| |