Gene VIBHAR_03316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03316 
Symbol 
ID5553023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3349467 
End bp3350357 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content45% 
IMG OID640908797 
Productlytic murein transglycosylase 
Protein accessionYP_001446491 
Protein GI156975584 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTACC TTGATGGTTA CAACACTCAA GCACATATCG ATTTCGAAAT GGGTAAGATC 
TATGTTTCGA CGATTTCCCA ATATCAGCCA ACAGAGAAGC TACAAAAAGC CATCGTACAG 
ACGCTACTCA TGCCTGCTGA TCCAGCACAT GCGGAGTTGT TTAGCGATAA AGAAGCGGTA 
TTGCGTGGTA AGCCGTTTTT ATTGGGGCAA GTTCTCGATC ACGATGGAAA GCCGATTGAA 
TGGGAGTGGC GTGCCAATCG CTACGCAGAC TACCTGCTTG ATAATAAACT GCAGAAGAAA 
GCCATCAAAC GCGGCAGTGC TTATTATGTC GAAATCAACA TGGTGAAAGA TCACCTAGAG 
CAGCGAGAAT ACCAGTACGC AGGCTTGGTA CGTGATGCAG CTAAACGATA TGACTTGTCT 
GAAGATCTAA TCTTCGCCGT GATCAAAACC GAAAGCAGCT TTAACCCTTA TGCGGTCTCT 
CATGCAGGGG CTTACGGCTT AATGCAGGTG ATCCCAAAAA CCGCCGGTGC TGATGTGTTT 
AATTTGGTGA AAAACAAACC AGGTATTCCT ACCAAAGAAT ACTTATTCGA TCCTGCCAAT 
AACATTGATA CTGGTGCAGC GTATTTCTAT ATATTGAAAA ACCGCTATCT AAGAGATGTA 
AAACATCCTA CTTCGAAACA CTTTAGTATG ATTTCAGCCT ATAACGGCGG CACAGGCGGC 
GTACTTTCTA CCTTCGATAG CGACCGAAAA CGCGCGATGA ATGAGCTTAA CAGCCTTAAC 
CCGACTCAGG TTTATGATGC GTTAACCACT CAACACCCAA AAGGGGAAGC AAGACGCTAC 
CTACAGAAAG TGCTGTATTT CCAAAAAGAC TTCAGCGAAG GGAATATCTA A
 
Protein sequence
MKYLDGYNTQ AHIDFEMGKI YVSTISQYQP TEKLQKAIVQ TLLMPADPAH AELFSDKEAV 
LRGKPFLLGQ VLDHDGKPIE WEWRANRYAD YLLDNKLQKK AIKRGSAYYV EINMVKDHLE 
QREYQYAGLV RDAAKRYDLS EDLIFAVIKT ESSFNPYAVS HAGAYGLMQV IPKTAGADVF 
NLVKNKPGIP TKEYLFDPAN NIDTGAAYFY ILKNRYLRDV KHPTSKHFSM ISAYNGGTGG 
VLSTFDSDRK RAMNELNSLN PTQVYDALTT QHPKGEARRY LQKVLYFQKD FSEGNI