Gene VIBHAR_03283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03283 
Symbol 
ID5556258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3306925 
End bp3307584 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID640908764 
Producthypothetical protein 
Protein accessionYP_001446458 
Protein GI156975551 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID[TIGR02451] anti-sigma factor, putative, ChrR family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC ATCCAGACAA AACATTGTTA GAGGCATATG CTTCCGGAAG TATTGATGCA 
GTTTCTGGTC TGGTGGTTGC CACTCACCTA GAAACCTGCC CCAAATGTCG AGCTTATGTC 
AATCAACTAG AGGCGGCTCA GGCCAGTTTG GTGAACGATA TACCGTCTAT TTATGACGCT 
GAGTTTGATA GTATGTTAAA CGACATTATC ACTTCAGAAC TAACGTCTGA CAGCATCATT 
GTTAGAGATG TCGCCAAAGT TATGGTCGCA GGCAAAGATT TCAAACTACC TAAAACACTG 
AGCCGTTTCT CAGACTTGGT GGGCGAATGG AAGAGCTATG GGGGCAAAGT CTACAGTGCA 
CAGATTGATC TAGGGGAAGA AGCGCGCGTC AACCTTATGT ATATAAGCGA AGACGTAAGG 
ATTCCGCAGC ACACGCACAA AGGTCAGGAA TCAACGCTAG TTTTACAAGG CGGCTTCAGT 
GATGAGGACG GGCATTACGA AGTTGGAGAT GTACTTGTAC GAGATGCATC TGCAAAACAT 
AGCCCATTCA CCAAGCCTGG CGAAGATTGC TTATGCCTAA CTGTATTGAC AGAGCCAATG 
ATCTTCACAC AAGGTGTGGC GAGAATCTTC AATATGTTTG GCAAAGGTAT GTATCCCTAA
 
Protein sequence
MNKHPDKTLL EAYASGSIDA VSGLVVATHL ETCPKCRAYV NQLEAAQASL VNDIPSIYDA 
EFDSMLNDII TSELTSDSII VRDVAKVMVA GKDFKLPKTL SRFSDLVGEW KSYGGKVYSA 
QIDLGEEARV NLMYISEDVR IPQHTHKGQE STLVLQGGFS DEDGHYEVGD VLVRDASAKH 
SPFTKPGEDC LCLTVLTEPM IFTQGVARIF NMFGKGMYP