Gene VIBHAR_03198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03198 
Symbol 
ID5553465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3224172 
End bp3225425 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content48% 
IMG OID640908679 
Producthypothetical protein 
Protein accessionYP_001446374 
Protein GI156975467 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG CGTTACAAGG CGCTCAGATG CTCTTTGTCG CTTTTGGTGC TCTCGTGCTG 
GTACCACTAC TGACTGGCCT TGACCCAAAC GTTGCGCTAT TTGGTGCTGG TGTGGGTACC
CTTCTTTTCC AACTGATTAC TAAACGTTCT GTCCCAATCT TCCTTGCCTC TTCTTTTGCG
TTTATTGCTC CTATTATGTT CGGTATCCAA ACTTGGGGTA TCGGTGCAAC CATGGGTGGC
TTAATGGCTG CAGGTTTGGT TTATGTGGCC CTGGGCGCAA TGATCAAAGT ACGCGGTGTT
GGCTTCATCC ATAAGATTCT GCCACCCGTT GTGGTTGGCC CAGTTATCAT GGTAATTGGC
CTTGGTCTGG CACCTACGGC AGTAAACATG GCAGTAGGTA AAACTGGTGA CGGCGCAGTG
CAACTTATCA ATGGCGATGC GGCAGTTATC ATCTCAGCAG TATCACTGCT AACAACGATT
GCACTGAGCG TGTTTGCGAA AGGTTTCCTA AAGCTGGTTC CTATCGTTGG AGGTATCTTG
GCAGGTTACT CTGTTTCTCT ATTCTATGGC GTTGTGGATT TCACTCCGGT AGCGCAAGCG
GCTTGGCTAG CCATGCCAAA CTTCACCGCA CCAGAGTTCA ACATCAATGC GATCTTATTC
ATGATCCCAG TGGCTATCGC TCCAGCAGTA GAGCACGTGG GTGACATGCT AGCGATTTCA
AACGTAACGG GTAAAAACTA CCTGAAGAAA CCGGGTCTGC ACCGCACCAT CTCAGGTGAC
GGAGTGGCAA CAATTGCGGC TTCTATGGTT GGCGCGCCAC CAAACACCAC TTACAGCGAG
GTAACCGGTG CGGTAATGCT AACGAAAGCA TTCAACTCAG TGATCATGAC ATGGGCAGCT
ATTACAGCAA TCGTCCTTGC TCTAGTGGGT AAGCTTGGCG CGATTCTTCA AACGATTCCA
GTTCCAGTAA TGGGCGGTAT CATGATTCTA CTGTTTGGTT CTATCGCAAC CGTTGGTCTA
AACACGCTGA TTAAGAACAA CGTTAACCTG CACAAATCTC GTAACCTAGT GATCGTAGCG
GTAACCCTAG TATTTGGTAT CGGCGGCATG GCTTTCGGTA TTGGTGAGTT CAGCCTACAA
GGTGTAAGCC TATGTGGTAT CGTTGCAATC ATTCTTAACC TAGTGCTACC ACACGACCTT
GGTGAAAACC ACGTAGTAGA TAATGCACAG ATGGAAGAAG ATAACGCGAA GTAA
 
Protein sequence
MKNALQGAQM LFVAFGALVL VPLLTGLDPN VALFGAGVGT LLFQLITKRS VPIFLASSFA 
FIAPIMFGIQ TWGIGATMGG LMAAGLVYVA LGAMIKVRGV GFIHKILPPV VVGPVIMVIG
LGLAPTAVNM AVGKTGDGAV QLINGDAAVI ISAVSLLTTI ALSVFAKGFL KLVPIVGGIL
AGYSVSLFYG VVDFTPVAQA AWLAMPNFTA PEFNINAILF MIPVAIAPAV EHVGDMLAIS
NVTGKNYLKK PGLHRTISGD GVATIAASMV GAPPNTTYSE VTGAVMLTKA FNSVIMTWAA
ITAIVLALVG KLGAILQTIP VPVMGGIMIL LFGSIATVGL NTLIKNNVNL HKSRNLVIVA
VTLVFGIGGM AFGIGEFSLQ GVSLCGIVAI ILNLVLPHDL GENHVVDNAQ MEEDNAK