Gene VIBHAR_03184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03184 
Symbol 
ID5553523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3212079 
End bp3212777 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content46% 
IMG OID640908665 
Producthypothetical protein 
Protein accessionYP_001446360 
Protein GI156975453 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAG AGCAACTTAC CGGAATCACC GATTCGCATC TTCAATCCAC GTTAATGGGT 
CAAAAGGCGT TTATGCTTCA CCCAGAAGTC GTCAATGATT TGTTGAAGAT GATTGAAGCC 
GCAACCGAAG CTGGCTTTAA GATGGAAATC GCCAGCGGCT TTCGCGATTT TCATCGTCAA 
AAAGCCATCT GGAACGGTAA GTTTGCTGGT GACTTAACGA TCTTAGATTC TCACTCCCAG 
CCTCTAGACA AGTCGAAACT CAGTGATGAA AAAAAGCTGA TGGCCATTCT TCGTTGGTCT 
GCCCTACCCG GCGGAAGCAG ACATCATTGG GGTTGTGATT TTGATGTCTA CGCGCGCAAC 
TTGTTACCGC CTGGCACGCA TTTGCAATTG GAGCCGTGGG AATACTTAGA AGGTCATCAG 
TTGGCGTTCT ATCGATGGTT GGAAGCCAAC CTAGATAGCT TTGGTTTTTT CTTCCCTTAC 
CGCCAAGATT TGGGTGGCGT GGCGATTGAG CCTTGGCACA TCAGTCATAA ATCGGTTGGG 
CTACAATGCT TAACTCATCT GACGCCCGAA ATGCTGAGAA ATCAGTTAAT TGAGCAAAAT 
CAGATCGACA GCATTGCAGG GATCGACGTC ATATTGAATA ATTTGGATAA GGTCGTTACC 
AAATTCATTC ACAATATCAC GCCTCCGGAG GCTATATGA
 
Protein sequence
MTPEQLTGIT DSHLQSTLMG QKAFMLHPEV VNDLLKMIEA ATEAGFKMEI ASGFRDFHRQ 
KAIWNGKFAG DLTILDSHSQ PLDKSKLSDE KKLMAILRWS ALPGGSRHHW GCDFDVYARN 
LLPPGTHLQL EPWEYLEGHQ LAFYRWLEAN LDSFGFFFPY RQDLGGVAIE PWHISHKSVG 
LQCLTHLTPE MLRNQLIEQN QIDSIAGIDV ILNNLDKVVT KFIHNITPPE AI