Gene VIBHAR_03096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03096 
Symbol 
ID5553680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3119449 
End bp3119940 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content44% 
IMG OID640908577 
Producthypothetical protein 
Protein accessionYP_001446272 
Protein GI156975365 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGT TAGATTTTGT CATTTTAGGT ATGATCGGAT TTTCAGCTCT GATCAGTTTA 
GTTCGCGGTT TTGCTAAAGA AGCTTTGTCT TTGGTGATTT GGTTCGGAGC ATTTTTTATC 
TCCAGTAACT ACTACGCCAA ATTGGCGGTG TATTTCACCA ACATCGAAGA CGAAATGTTT 
CGAAACGGAG CCGCAATTGC GGCGTTATTC GTCGCAACCC TAGTGGTTGG TGCAGTGGTG 
AATTACGTCA TTGGTCAACT GGTACAAAAA ACAGGACTGT CAGGTACCGA TCGAATTCTC 
GGTGTGGTGT TTGGTGGTTT ACGCGGAGTA CTGATTGTTT CTGCGGTGCT GTTTTTTATG 
GATGCGTTTA CTGCATTCCC AAGCTCGGAT TGGTGGAAAG AGTCACAGTT GGTCCCTGAG 
TTCAGCCGTA TCATCGCCCC ATTCTTCGAG CATTTAAAAG CAACATCAAG TTTTCTGTCT 
GGCACTATCT AG
 
Protein sequence
MNWLDFVILG MIGFSALISL VRGFAKEALS LVIWFGAFFI SSNYYAKLAV YFTNIEDEMF 
RNGAAIAALF VATLVVGAVV NYVIGQLVQK TGLSGTDRIL GVVFGGLRGV LIVSAVLFFM 
DAFTAFPSSD WWKESQLVPE FSRIIAPFFE HLKATSSFLS GTI