Gene VIBHAR_02762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02762 
Symbol 
ID5554727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2785087 
End bp2786277 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content49% 
IMG OID640908244 
Producttryptophan synthase subunit beta 
Protein accessionYP_001445943 
Protein GI156975036 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC TGAATGCCTA CTTTGGCGAA TACGGCGGTC AGTACGTTCC GCAAATTCTA 
GTTCCGGCAC TGGAGCAACT AGAGCAAGCG TTTATCGACG CGCAAGAAGA CCCTGAATTC 
CGCAGCGAAT TCATGACGCT TCTGCAAGAG TATGCGGGCC GCCCAACGGC TTTAACTCTA 
ACTCGTAACC TAACTAAAGG TACGAAAACC AAACTGTACC TAAAACGTGA AGACTTGCTT 
CACGGTGGTG CCCACAAGAC TAACCAAGTG TTGGGGCAAG CGCTACTTGC GAAACGCATG 
GGCAAAAACG AAATCATCGC TGAAACTGGC GCAGGTCAAC ACGGTGTTGC AACCGCACTA 
GCATGTGCGC TGCTTGGCCT TAAGTGTCGT GTTTACATGG GTGCAAAAGA CGTTGAGCGT 
CAAAGCCCGA ACGTATTCCG TATGAAACTC ATGGGTGCAG AAGTTATTCC TGTCCACTCT 
GGTTCAGCAA CACTTAAAGA CGCATGTAAC GAAGCATTAC GCGACTGGTC TGCAACTTAT 
GAAGACGCGC ACTACCTATT AGGCACAGCG GCAGGTCCTC ACCCATTCCC AACCATCGTG 
CGCGATTTCC AACGCATGAT TGGTGAAGAA ACGAAGAATC AGATTTTGGC ACGTGAAGGT 
CGTCTTCCTG ACGCCGTTAT CGCGTGTGTG GGCGGTGGTT CAAACGCTAT CGGCATGTTT 
GCTGACTTCA TCGAAGAAGA AAGTGTTCGC CTAATTGGTG TTGAGCCAGC AGGTAAAGGT 
ATCGATACCG ACCAACACGG CGCGCCACTT AAACATGGTA AAACGGGTAT CTTCTTTGGT 
ATGAAAGCGC CACTGATGCA AGATCCAAAC GGTCAGGTTG AAGAATCATA CTCTGTTTCT 
GCTGGTCTTG ATTTCCCTTC AGTTGGTCCA CAGCACGCAC ACCTGAACGC AATCGGCCGC 
GCTGAATACG ACAACGTAAC GGATGACGAA GCGCTAGAGG CGTTCCAAGA AATTGCGCGT 
CACGAAGGCA TCATCCCAGC TCTAGAGTCC TCTCACGCTG TAGCACATGC ACTGCGTATG 
GCTCGTGAGA ATCCAGAAAA AGAACAATTG TTAGTTGTGA ACCTATCAGG TCGTGGTGAT 
AAAGATATCT TCACTGTACA TGCCATCCTA GAAGAAAAAG GAGCGATCTA A
 
Protein sequence
MAKLNAYFGE YGGQYVPQIL VPALEQLEQA FIDAQEDPEF RSEFMTLLQE YAGRPTALTL 
TRNLTKGTKT KLYLKREDLL HGGAHKTNQV LGQALLAKRM GKNEIIAETG AGQHGVATAL 
ACALLGLKCR VYMGAKDVER QSPNVFRMKL MGAEVIPVHS GSATLKDACN EALRDWSATY 
EDAHYLLGTA AGPHPFPTIV RDFQRMIGEE TKNQILAREG RLPDAVIACV GGGSNAIGMF 
ADFIEEESVR LIGVEPAGKG IDTDQHGAPL KHGKTGIFFG MKAPLMQDPN GQVEESYSVS 
AGLDFPSVGP QHAHLNAIGR AEYDNVTDDE ALEAFQEIAR HEGIIPALES SHAVAHALRM 
ARENPEKEQL LVVNLSGRGD KDIFTVHAIL EEKGAI