Gene VIBHAR_02394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02394 
Symbol 
ID5556076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2401767 
End bp2402954 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content50% 
IMG OID640907880 
Producthypothetical protein 
Protein accessionYP_001445583 
Protein GI156974676 
COG category[S] Function unknown 
COG ID[COG2828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02334] probable AcnD-accessory protein PrpF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCA AGATGCAAAG CCAAATCAAA GTCCCAGCGA CTTACATGCG CGGCGGTACG 
AGCAAAGGTG TGTTCTTCAA CCTTGAAGAT TTGCCACAAC CAGCGCAAGT CGCAGGCGAG
GCAAGAGACA AACTGCTACT TCGTGTGATT GGTAGCCCAG ACCCGTATGC CAAACAAATT
GATGGCATGG GCGGCGCGAC TTCCAGCACC AGTAAAACTG TGATTGTGTC GCGCAGTGAG
CGAGCCGATC ACGACGTTGA TTACCTGTTC GGGCAAGTAT CAATAGATAA GCCGTTTGTC
GATTGGAGTG GTAACTGCGG CAACCTTTCT GCTGCAGTCG GGCCTTTCGC CATTCATGCT
GGGTTGATCG ACGAAGATCG TATTCCTCAA AACGGCATCG TTACCGTTCG TGTATGGCAG
GTAAATATTG GCAAAACCAT ATTGATTCAT GTGCCAATCG TAAATGGTTT CGTTCAAGAA
ACGGGGGCGT TTGAGCTTGA TGGAGTGACG TTCCCAGCGG CAGAAATCCA AGTTGATTTT
GTCGACCCTG CTGATGGCGA AGGCAGCATG TTTCCAACCG GTAATCTAGT AGACGATTTG
GTCGTACCGG ATGTTGGGAC GTTCAACGCC ACCTTCATTA ACGCAGGCAT ACCGACGATC
TTCATTGATG CAGAAGCACT TGGCTACCAA GGCACTGAGC TTCAAGATGA CATCAATAAC
GATGAATTTG CGCTCGCGAG GTTTGAGTCC ATTCGTGCTC ATGGCGCGTT AAAAATGGGG
CTTATTGATT CACTCGAAGA GGCTCAAACA CGTCAACACA CGCCTAAGAT TGCGTTTGTT
TCCCAGCCTA AATCCCATTT ATCGTCGAGT GGTAAAACCG TAGAAGCAGG TGAGGTCGAT
ATTCTAGTCC GGGCTTTATC TATGGGTAAA CTTCACCACG CTATGATGGG AACCGCAGCA
GTCGCCATTG CCTCGGCGGT ATGCGTACCT GGTACTTTGG TCAATTTAGC GGCTGGTGGC
GGAGAGAAAG AATCTGTGAC GTTTGGGCAT CCATCAGGAA CGCTTAAGGT GGGGGCAAAA
GCCAAACAAA CAGAACAAGG TTGGGTGGTT GAGAAAGCCA TCATGAGCCG CAGCGCGAGA
ATACTGATGG AGGGCTTTGT GTGTGTTCCC TCCAATGTCT TTGAATAG
 
Protein sequence
MDSKMQSQIK VPATYMRGGT SKGVFFNLED LPQPAQVAGE ARDKLLLRVI GSPDPYAKQI 
DGMGGATSST SKTVIVSRSE RADHDVDYLF GQVSIDKPFV DWSGNCGNLS AAVGPFAIHA
GLIDEDRIPQ NGIVTVRVWQ VNIGKTILIH VPIVNGFVQE TGAFELDGVT FPAAEIQVDF
VDPADGEGSM FPTGNLVDDL VVPDVGTFNA TFINAGIPTI FIDAEALGYQ GTELQDDINN
DEFALARFES IRAHGALKMG LIDSLEEAQT RQHTPKIAFV SQPKSHLSSS GKTVEAGEVD
ILVRALSMGK LHHAMMGTAA VAIASAVCVP GTLVNLAAGG GEKESVTFGH PSGTLKVGAK
AKQTEQGWVV EKAIMSRSAR ILMEGFVCVP SNVFE