Gene VIBHAR_02102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02102 
Symbol 
ID5554449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2102760 
End bp2104166 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content46% 
IMG OID640907589 
Producthypothetical protein 
Protein accessionYP_001445294 
Protein GI156974387 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGTCC TGACCTTGCC ATTCCAGAGG TTTTCGCCTC CCACAATTCA TAACGTTTTC 
ATCTCGTATC AAGGAGAAAA AGTGAATATA ACAATAAAAG ATGTTGTCGG TATTGGAATA
GGACCATTTA ACCTAGGGCT TGCTGCTTTA ACTGCTCATC AACCTAAGCT CGACACCGAG
TTTATTGAGC GGCGGGATGG ATTTAATTGG CACAGTGGTA TGTTATTACC GGGTGCAACT
TTACAGGTTC CTTTTTTGGC CGACCTGGTC ACTATGGCCG ATCCTACTCA TCCGTTAAGC
TATTTAAACT ATCTCAAACA ACATGATCGC TTGTACCAAT TTTACTATTA TGAAACGTTC
CTTGTGCCGC GCAGCGAATA TAACCATTAC TGTCAATGGT CGGCTGAGCA ACTAGAAAAC
TGTACCTACA GTGAAAATGT TGTCGGTGTT GAATACTCTC AAGAAAATGA GTGCTTTAAG
GTTCAAAGTG AATCGACTGA CGGTGGAATT AAAGAACGTT ACAGTCGAAA TCTAGCGATC
GGTGTTGGTA CTGCACCTTG GCTACCGGAG TGGGCAAGCC ATGCTGCTCA CCCGTTGATT
CAGCACTCTG CTAAATTTGC ACACATGCGC GAGGAATTGG CTAAATGTAA CAGCGTCACC
GTGGTAGGTT CGGGCCAAAG TGCAGCGGAG TGTGTTCTCA ACTTATATCG AGATTTGACT
GATGAGCAGA TCAAAGGCGG CGCGAGGGTT AATTGGGTAA CTCGCTCTGC TGGCTTCCAT
CCGATGGAAG CATCTAAGCT CGGCCAAGAG TGCTTTACTC CAGCATACAT GGACTATTTT
CACACGCTTT CACGTCAGAA ACGTCGAAAC ATCGTAGAAG GACAAGGGCA ACTATATAAA
GGGATAAGTG GGTATACCAT CGCGGATGTC TTTGACTTAC TTTATGAGCG TTCGATAGGA
GGGCGAGAGC CGGGACTGAA TTTGTATTCT AACTGTCAGG TGAATGATAT TGAGATTATC
GACGGCTCTG ATGTATTTGC GGTGTCGTGT TATCAATCAC AGCAGGAAGA AGCATTCACA
CTTCATACTA ATGCTGTCAT TTGTGCGACA GGTTACACGC ATCAATGGCC AGCATGGTTG
GAGGCACTGA AAGGATCGGT GTTAGCCGTG GATGAGCATG GCGATTTGAT TGTCGAATCG
GACTTTTCCG CCCAACGTTG TGATCAGGGG GTTGGACACG TCTTTGTCCA AAATCCAGAA
GTCTTCCAAC ATGGCGTCGG TGGTCCCGAC CTGGGGATTG GTGCTCATCG AAACGCTTCA
ATCATCAATA CGGTGTTAGG CGAAGAAGTG TATCGTTTAC CTAAGAAGTC GGCTTTCCAA
ACTTACGGCA CTCCAGAGGC ACATTGA
 
Protein sequence
MVVLTLPFQR FSPPTIHNVF ISYQGEKVNI TIKDVVGIGI GPFNLGLAAL TAHQPKLDTE 
FIERRDGFNW HSGMLLPGAT LQVPFLADLV TMADPTHPLS YLNYLKQHDR LYQFYYYETF
LVPRSEYNHY CQWSAEQLEN CTYSENVVGV EYSQENECFK VQSESTDGGI KERYSRNLAI
GVGTAPWLPE WASHAAHPLI QHSAKFAHMR EELAKCNSVT VVGSGQSAAE CVLNLYRDLT
DEQIKGGARV NWVTRSAGFH PMEASKLGQE CFTPAYMDYF HTLSRQKRRN IVEGQGQLYK
GISGYTIADV FDLLYERSIG GREPGLNLYS NCQVNDIEII DGSDVFAVSC YQSQQEEAFT
LHTNAVICAT GYTHQWPAWL EALKGSVLAV DEHGDLIVES DFSAQRCDQG VGHVFVQNPE
VFQHGVGGPD LGIGAHRNAS IINTVLGEEV YRLPKKSAFQ TYGTPEAH