Gene VIBHAR_01988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01988 
Symbol 
ID5553180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1983880 
End bp1984518 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID640907475 
Producthypothetical protein 
Protein accessionYP_001445180 
Protein GI156974273 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGACT TAATCCAGCA GATAGTTCTG GCTGAGTTAG AAGAGTATTC TCAGCAGTTT 
TCTCAGCAAG AAAAAGAAAT CACCGAGTTG AAACGCCGTC TAAACAACAT GATTAAAGTC 
GGCAAAGTTT CTGCTTGGAG TGATGACCAT AAACGAATCA AAGTAAAATT TGGCGGTAAT 
GAAACGCCAT TGATTAAATG GTTTTCTGCA TGTGCAGGCG ATGTAGCTGA ATATCGCCTT 
CCTAGTATTG GAGAGCAGGC AGTATTGCTC AATGTTGGCG GTGGGGATAA CTCTACGACC 
AGCATTGCCT TGATTGGCGT TCCAAGTGAT CAGTTCCCAC TTCCTACCGA TAATCCTGAT 
GAGACGCTTC GGGTTTACCC TGATAAGACG TCAGTGAAAT ATAACCATGT TTCCCACAAG 
CTAACGATTG ATATTAAGTC GGGGGAAGCG GAAGTAATCG CCCCTAAGAG AATTAAGCTT 
GATACGCCGC TTCTCTATGT AACTGGAAGT ATTAAAGCTG ATGGTGACGT TACAGACCAC 
ACTCGCTCAA TGAAAGCAGA TAGGGTTATT TACAACGGTC ACAAACATGA ATCTCCAGAG 
ACCAAAGCAC CGACCTCAAC GCCGAATAAG GAACAGTAA
 
Protein sequence
MRDLIQQIVL AELEEYSQQF SQQEKEITEL KRRLNNMIKV GKVSAWSDDH KRIKVKFGGN 
ETPLIKWFSA CAGDVAEYRL PSIGEQAVLL NVGGGDNSTT SIALIGVPSD QFPLPTDNPD 
ETLRVYPDKT SVKYNHVSHK LTIDIKSGEA EVIAPKRIKL DTPLLYVTGS IKADGDVTDH 
TRSMKADRVI YNGHKHESPE TKAPTSTPNK EQ