Gene VIBHAR_01867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01867 
Symbol 
ID5555105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1879061 
End bp1880056 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content48% 
IMG OID640907356 
Producthypothetical protein 
Protein accessionYP_001445061 
Protein GI156974154 
COG category[V] Defense mechanisms 
COG ID[COG4170] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTAC TAGATATTCG ACATTTAACC ATTGAAATTG AAACGCCATC AGGTTTGGTG 
AAAGCCGTCG ACCGCATGAG CATTACCCTA AATGAAGGGG AAATCCGTGG TCTAGTGGGC 
GAATCAGGTT CAGGTAAGAG TCTGGTTGCC AAAGCAATTG TTGGCGTTTG TAAGGACAAC 
TGGAAAGTCA CCGCGGACCG AATGCGCCTT GGTAACATTG ACTTGCTTCA ATTGACACCG 
AAAGAGCGCC GACGAGTGAT AGCTCGCGAT ATCGCGATGA TCTTCCAAGA GCCTTCGACC 
TGTTTAGATC CTTCTGAAGA AGTAGGACGT CAATTGATCG AATCGATCCC TTCTCGCTCT 
TTCGAAGGAA AATGGTGGGA ACGATTCAAA TGGCGTAAAA AACAGGCGAT TGCCCTACTC 
CACAAAGTGG GCATCAAAGA TCACAAACGC TTGATGGGCA GCTACCCTTA CGAGCTAACC 
GACGGTGAAT GTCAGAAAGT CATGATCGCG ATGGCCATTG CAACCAAGCC AAAAATCTTG 
ATTGCCGACG AACCAACCAA CGACCTTGAC CCAATCACGC AGTCACAAAT CCTGCGTTTG 
TTGAGCCGAA TGAATCAGCT CAACAACACC ACGATTGTGT TGATTGGCCA TGACTTGACC 
ACCATTACTC AATGGGCGAA TCGTATTACG GTAATGTATT GCGGCCAATC AGTTGAATCC 
GCTGACACCG AGAAGTTGGT TGAGGCTCCG AAGCATCCAT ATACTGCGGC ACTGCTCAAA 
GCAATGCCCG ACTTTAATGA TTGGATTCCT CATAAGCAGA AACTGCAATC ACTACCGGGG 
TCAATACCCC CTTTGCAGCA CTTGCCAATC GGCTGTCGCT TAGGGCCTCG TTGCCCTTAT 
GCACAAAGAC AATGTGTCGA GATACCCCAT ACGAGACGTA TCAAGACTCA TAAATTTAGC 
TGTCACTTCC CATTGAACAC GGAGAAACAT TCATGA
 
Protein sequence
MPLLDIRHLT IEIETPSGLV KAVDRMSITL NEGEIRGLVG ESGSGKSLVA KAIVGVCKDN 
WKVTADRMRL GNIDLLQLTP KERRRVIARD IAMIFQEPST CLDPSEEVGR QLIESIPSRS 
FEGKWWERFK WRKKQAIALL HKVGIKDHKR LMGSYPYELT DGECQKVMIA MAIATKPKIL 
IADEPTNDLD PITQSQILRL LSRMNQLNNT TIVLIGHDLT TITQWANRIT VMYCGQSVES 
ADTEKLVEAP KHPYTAALLK AMPDFNDWIP HKQKLQSLPG SIPPLQHLPI GCRLGPRCPY 
AQRQCVEIPH TRRIKTHKFS CHFPLNTEKH S