Gene VIBHAR_01423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01423 
Symbol 
ID5552904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1441438 
End bp1441926 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content50% 
IMG OID640906914 
Producthypothetical protein 
Protein accessionYP_001444625 
Protein GI156973718 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCC TAACCGAATG GCACGCCTAC AATATACGCC ACGGCGAATG GTGGCGAATC 
GTAACAGGAA ATCTCACGCA TACCAACTTT GCTCACCTCG GGATGAATCT CGCTGGTTTA 
TGGGTGATCG GGTTTATCTT CCGCCCTACC GTGCGTAATT TCACCATCGT ATTTCTCGTT 
TTGTGTACCT TCGTTGGTGC AATGAACTTG TTCACCAATA TGTCGGTTTA CGTCGGGCTG 
TCTGGTGTGC TGCACGGCTT ATTCGGCTTC TGGGCGCTGG CTGAGGTTTT CGACGGTAGA 
AGAAGCAGTT TAGTGCTAGT AGGCGGTTTA ATTACTAAAG TCGCTTGGGA GCAGTTCTAC 
GGCCCTTCAA CAAGCACTGC GGCAATGATT GGGGCTCGTG TGGCGGTAGA TGCTCATCTG 
TTTGGTGCAA TAGGTGGTTT GAGTATGGCT TGGTTAGAGA AACTGACCCA TCGTCGTATC 
TTTGGCTAA
 
Protein sequence
MASLTEWHAY NIRHGEWWRI VTGNLTHTNF AHLGMNLAGL WVIGFIFRPT VRNFTIVFLV 
LCTFVGAMNL FTNMSVYVGL SGVLHGLFGF WALAEVFDGR RSSLVLVGGL ITKVAWEQFY 
GPSTSTAAMI GARVAVDAHL FGAIGGLSMA WLEKLTHRRI FG