Gene VIBHAR_01348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01348 
Symbol 
ID5553961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1357142 
End bp1357900 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID640906840 
Producthypothetical protein 
Protein accessionYP_001444552 
Protein GI156973645 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACT TACAGCTGGA AAAGATCCTT AACGAGAAAC TGTCTCCGCA ACTTATTAAA 
GACTACGCAC CGAATGGAAT GCAAGTAGAA GGCAAATCAG AAATCAAACG CATCGTGACA
GGCGTAACAG CTTCACAAGC ATTGATCGAT AAAGCCATCG AGCTAGATGC TGATGCGCTG
CTTGTTCACC ACGGCTACTT TTGGAAAGGC GAGCCAGAGC CTATTCGTGG TATGAAAGGA
AAGCGTATCC GTAGCTTGAT CAAAAATGAT ATCAACCTAT ATGGCTACCA CTTACCGTTA
GACATTCATC CTGAGCTAGG TAATAACGCA GAACTTGCTC GCTTGCTAGA TATTGAAGTG
GAAGGCGGCT TGGAAGGGCA CCCACAATCG GTAGCGATGT TTGGGCGCTT GAAACAGGCA
ATGACAGGCG CTGAATTCGC ACACAAAATC AATCAAGTCC TAAACCGTGA ACCTTTGCAT
ATTGCGCCTG AAAATTCAGA CAAAATGATT GAAACTGTTG GCTGGTGTAC CGGCGGTGGT
CAGGATTTTA TTGAGCTTGC TGCTCAGCAT GGATTAGATG CATTTATTTC GGGCGAGATC
TCAGAACGTA CGACTTACAC GGCTCGTGAA TTGGATATCC ATTACTTCTC TGCAGGTCAT
CACGCAACCG AACGTTACGG TATTAAAGCG TTGGGTGAAT GGTTAGCGCA AGAGCACGGT
TTAGACGTTA CGTTTATTGA TATTGATAAC CCAGTATAG
 
Protein sequence
MNNLQLEKIL NEKLSPQLIK DYAPNGMQVE GKSEIKRIVT GVTASQALID KAIELDADAL 
LVHHGYFWKG EPEPIRGMKG KRIRSLIKND INLYGYHLPL DIHPELGNNA ELARLLDIEV
EGGLEGHPQS VAMFGRLKQA MTGAEFAHKI NQVLNREPLH IAPENSDKMI ETVGWCTGGG
QDFIELAAQH GLDAFISGEI SERTTYTARE LDIHYFSAGH HATERYGIKA LGEWLAQEHG
LDVTFIDIDN PV