Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01348 |
Symbol | |
ID | 5553961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1357142 |
End bp | 1357900 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640906840 |
Product | hypothetical protein |
Protein accession | YP_001444552 |
Protein GI | 156973645 |
COG category | [S] Function unknown |
COG ID | [COG0327] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACT TACAGCTGGA AAAGATCCTT AACGAGAAAC TGTCTCCGCA ACTTATTAAA GACTACGCAC CGAATGGAAT GCAAGTAGAA GGCAAATCAG AAATCAAACG CATCGTGACA GGCGTAACAG CTTCACAAGC ATTGATCGAT AAAGCCATCG AGCTAGATGC TGATGCGCTG CTTGTTCACC ACGGCTACTT TTGGAAAGGC GAGCCAGAGC CTATTCGTGG TATGAAAGGA AAGCGTATCC GTAGCTTGAT CAAAAATGAT ATCAACCTAT ATGGCTACCA CTTACCGTTA GACATTCATC CTGAGCTAGG TAATAACGCA GAACTTGCTC GCTTGCTAGA TATTGAAGTG GAAGGCGGCT TGGAAGGGCA CCCACAATCG GTAGCGATGT TTGGGCGCTT GAAACAGGCA ATGACAGGCG CTGAATTCGC ACACAAAATC AATCAAGTCC TAAACCGTGA ACCTTTGCAT ATTGCGCCTG AAAATTCAGA CAAAATGATT GAAACTGTTG GCTGGTGTAC CGGCGGTGGT CAGGATTTTA TTGAGCTTGC TGCTCAGCAT GGATTAGATG CATTTATTTC GGGCGAGATC TCAGAACGTA CGACTTACAC GGCTCGTGAA TTGGATATCC ATTACTTCTC TGCAGGTCAT CACGCAACCG AACGTTACGG TATTAAAGCG TTGGGTGAAT GGTTAGCGCA AGAGCACGGT TTAGACGTTA CGTTTATTGA TATTGATAAC CCAGTATAG
|
Protein sequence | MNNLQLEKIL NEKLSPQLIK DYAPNGMQVE GKSEIKRIVT GVTASQALID KAIELDADAL LVHHGYFWKG EPEPIRGMKG KRIRSLIKND INLYGYHLPL DIHPELGNNA ELARLLDIEV EGGLEGHPQS VAMFGRLKQA MTGAEFAHKI NQVLNREPLH IAPENSDKMI ETVGWCTGGG QDFIELAAQH GLDAFISGEI SERTTYTARE LDIHYFSAGH HATERYGIKA LGEWLAQEHG LDVTFIDIDN PV
|
| |