Gene VIBHAR_01279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01279 
Symbol 
ID5553092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1289370 
End bp1289795 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID640906771 
Productflagellar biosynthesis/type III secretory pathway chaperone 
Protein accessionYP_001444483 
Protein GI156973576 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAT TAGTCGATCT TGTTAACTTC CAGCTAGAAA ATGCAAAAGC ACTTTCTGGA 
GTGTTACGTC AAGAAACACA GGCGATCAGC GCACGTGTAT CTACTGAGAT CGAGAAACTT 
GCCAAAGAAA AGATGACACT CATTGGTCAA TTGAGAACCA CTGACCAGCG AATCGCCTCT 
CACCCGCACG TCAATCAACT TACCGAAGAC GAAAGCCTAA GTCAGGTTGT CGCACAGATC 
CAATCCATCA TTCTCGATTG TCAGCAAGTA AACCAAATGA ACGGTGAGTC GCTCAATCGT 
GCCCAATCCA GCTTCAATAA ACTTAACAAC ATGCTTCAGC GTACCCACGG TAAGGTCGGC 
ATGACCTACA ATGCCGGCGG CAAAACTCAT ACCATTTCAA CGCTAGGCAC TAACATCAAA 
GCCTAA
 
Protein sequence
MAALVDLVNF QLENAKALSG VLRQETQAIS ARVSTEIEKL AKEKMTLIGQ LRTTDQRIAS 
HPHVNQLTED ESLSQVVAQI QSIILDCQQV NQMNGESLNR AQSSFNKLNN MLQRTHGKVG 
MTYNAGGKTH TISTLGTNIK A