Gene VIBHAR_01221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01221 
Symbol 
ID5554966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1240176 
End bp1240733 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID640906713 
Producthypothetical protein 
Protein accessionYP_001444437 
Protein GI156973530 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTT TCTCTTTGAT TAAACTACCA GTGGTTTTGG TATTAGCGGG GCTTCTTTCT 
GCCTGTGGTT TTCACCTTCG TGGCGAGTAC TCCGTTCCAG AAGAGCTCCA CACCATGTCT 
TTCACTAGCT ATGATGAATA CAGCCCATTG ACGCGTTACA TCCGCGCTCA ACTTGAATTG 
AACAAGGTCG ATTTAGTAAA ACCGTCATCA AATACTCCGA ACCTACACCT TAGTGAAGCG 
ACCATTGACG AGCGTACGCT ATCGCTTTAC CAAAACAGCC GAGCAGCAGA AAAAGAACTG 
ACTTACGTGG TGAAATACCG CGTGACGATC CCTGGCTTCG GTGCAAAAGA TTTCACGACC 
ACCGTTAACC GTAACTACCT AGATAACCCG CTAACTGCAC TAGCGAAATC AGTAGAACGT 
GACGTTATCG AAGATGAAAT GCGTCAACAA GCGGCTGGCC AAATGATGCG CCAACTAGGT 
CGAGTTCGTG CTGAATACGA ACAAGGCAAC GTTGCTCCTG AAGCGACAAA CGCTAACTCT 
ACGAACACAA ACTCTTAA
 
Protein sequence
MRFFSLIKLP VVLVLAGLLS ACGFHLRGEY SVPEELHTMS FTSYDEYSPL TRYIRAQLEL 
NKVDLVKPSS NTPNLHLSEA TIDERTLSLY QNSRAAEKEL TYVVKYRVTI PGFGAKDFTT 
TVNRNYLDNP LTALAKSVER DVIEDEMRQQ AAGQMMRQLG RVRAEYEQGN VAPEATNANS 
TNTNS