Gene VIBHAR_01198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01198 
Symbol 
ID5556150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1215044 
End bp1215913 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID640906690 
Product2',3'-cyclic-nucleotide 2'-phosphodiesterase 
Protein accessionYP_001444414 
Protein GI156973507 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTGA TTAACCAAAT CCAAATGCAG AAAATTGAAG AGGCGATGGG TGAGGGGAAT 
GGTGCGATTG TCTCTGCTGC GTCGTTGTTC TCTGATCAAT CTAACCTAAT CGACAACGAA 
GTGTACACCA AAGGTAAGTC GACCAACTTG TACAAGTACG ATAACACCTT ACTTGGCGTA 
GAGATGACAG GTACGAACCT AAAACGCTTC ATTGAGTGGT CGTACTCTTA CTTCAACCAA 
TATAAACCGG GTGATATTAC CGTATCGTTC AAGAAAGGCG CGCCAGCTTA TCTTTACGAT 
CAATTCGATG GTGATATCGA GTTCACTGTT GATCTAAGTA AGCCGTCTCT TGAGATGGAT 
GAGAACAACG CAGTGACGAA TGAAGGTAGC CGTGTGAACA TTACCAGTAT TGGTGGTGAG 
CAGTTCGATC CGAACGCGAC CTATAAAGTG GCGATGAACA GCTACCGCTT TGGTTCGCAA 
ATCCAGAAAT ATGGCTGGGC GAGCAAAGAC GACGTGTTCT ATGACTCAGT GAACGAGCAA 
GTCTACGCAA TTCGCGATAT GCTGACGGCT TATGTTGAAG AGCACAAAGG CATTGATGTG 
GCGGACTTCA GTGGCAGCCT TGGTAACTGG TCGTTCACTC AATACCTACC AAGTGGTGAC 
ATCACGACAC TGCGTGAGGG CGAAGGCAAA GCGCTGTGGG ATCAATTGAA GAACATGGAA 
ATCTGTGTCT CGATTGATTT AGAAAACCCG AAATACCCAG CGATTGTTAA GTCTGTGAAC 
ATCAATGATT CATCTAGCTA CTTTGTTAAC CCTAACAAAG ACGCGGCGAC CCTTGATGAG 
AAAGTCGCAG GTTGTAATCC AACTCATTAA
 
Protein sequence
MDVINQIQMQ KIEEAMGEGN GAIVSAASLF SDQSNLIDNE VYTKGKSTNL YKYDNTLLGV 
EMTGTNLKRF IEWSYSYFNQ YKPGDITVSF KKGAPAYLYD QFDGDIEFTV DLSKPSLEMD 
ENNAVTNEGS RVNITSIGGE QFDPNATYKV AMNSYRFGSQ IQKYGWASKD DVFYDSVNEQ 
VYAIRDMLTA YVEEHKGIDV ADFSGSLGNW SFTQYLPSGD ITTLREGEGK ALWDQLKNME 
ICVSIDLENP KYPAIVKSVN INDSSSYFVN PNKDAATLDE KVAGCNPTH