Gene VIBHAR_01025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01025 
SymbolrdgC 
ID5555595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1031130 
End bp1032044 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content46% 
IMG OID640906519 
Productrecombination associated protein 
Protein accessionYP_001444245 
Protein GI156973338 
COG category[L] Replication, recombination and repair 
COG ID[COG2974] DNA recombination-dependent growth factor C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTTA AAAACTGTCT GGTATACCGC GTTAACCGCG AGGTTAACTT CAACGCCGAT 
CAACTGGAAA CTCAACTAGC CGAGTTCCGA TTCACCCCTT GTGGCAGCCA AGATAAGCAA
AAGTTTGGTT GGGTTAGCGC GATGGGTAGA AATGGCGACA TGATGACGCA CGTTTCTGAA
AACCGCATTC TGATTTGCGC TAAGAAAGAA GAGAAAATGC TGCCAGCTTC GGTGATCAAA
GATTCACTAA ACGCGAAAGT AGAAGCAATG GAAGCACAAG AAGGTCGTCC TCTTAAAAAG
AAAGAAAAAG ACAACCTTAA AGATGACATA GTAATGGATC TGCTGCCTCG TGCATTCAGC
CGCAGCAGCC ACACTTACGT ACTTATCATG CCAAAAGAAG GCTTCATCCT TGTTGATGCA
AGCAGCTACA AAAAAGCAGA AGACGTGTTA GCACTATTGC GTAAAACAAT GGGTAGCCTA
CCTGTTGTAC CAGCAATCCC AGAAGTTGCT ATCGAAACGA CGCTAACGGA ATGGGTGAAA
ACCGGTGATA CGCCACAAGG CATTTCTATG ATGGACGAAG CTGAACTTAA GTCTGTGCTA
GAAGAAGGCG GCGTGATTCG TTGTAAGAAG CAAGAGCTGA CAACCGATGA AATCCGCAAC
CACATCGCTG CAGACAAAGT AGTGACTAAG CTAGCACTGA ACTGGCAAGA TCGTATCGAA
TTCATCATGG CAGAAGATTC TGGCATCAAA CGTCTGAAGT TCTCTGATGA ACTAAAAGAT
CAAAACGATG ACATCCCACG CGAAGATCAA GCTGCTCGCT TCGACGCAGA CTTCTCTCTA
ATGTGTGGCG AGTTCAGCGC TTTCCTACCA AATCTATACG AAACATTGGG CGGCCTGCCA
AACCCTAACG CTTAA
 
Protein sequence
MWFKNCLVYR VNREVNFNAD QLETQLAEFR FTPCGSQDKQ KFGWVSAMGR NGDMMTHVSE 
NRILICAKKE EKMLPASVIK DSLNAKVEAM EAQEGRPLKK KEKDNLKDDI VMDLLPRAFS
RSSHTYVLIM PKEGFILVDA SSYKKAEDVL ALLRKTMGSL PVVPAIPEVA IETTLTEWVK
TGDTPQGISM MDEAELKSVL EEGGVIRCKK QELTTDEIRN HIAADKVVTK LALNWQDRIE
FIMAEDSGIK RLKFSDELKD QNDDIPREDQ AARFDADFSL MCGEFSAFLP NLYETLGGLP
NPNA