| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01003 |
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| Symbol | |
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| ID | 5554592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 1012800 |
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| End bp | 1014269 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640906497 |
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| Product | hypothetical protein |
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| Protein accession | YP_001444229 |
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| Protein GI | 156973322 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTGA ATGTGACCCT ATCAAAGCTA TGGGCGGGAC TGTTGATCCT ACTCTCCACT
TCGAGTTTTG CGCTCGAACT GTCCCCTCTC AGACAACCAC CTTACACCGG CGATCTCGAC
ATTATCAAAG AGAAAAATGT TCTGCGAGTT TTGGTGTCTG CCGATCTTGG TTTCTATTAC
ATCGAAGGTG GGGAGCCAAA AGGCATTGGT GCAGAGTTAC TGGCTCATTT CGAAAAAGAT
CTTCGTAAAC TGAAACCTAA AATCAATATT CAAATCATTC CCGTTTCTAG AGATCAGCTA
CTTCCCTCAC TAGAACAAGG CTTAGGGGAT TTAGTCGTCG CGAACCTCAC TATCACCGAT
GCGCGTAAGA AATCAGTTAG CTTCAGCGAT CCTGTCATAA CTGGAATTCA AGAGTGGGTG
GTCACCGATA AAGACACTCC AGCAATGACC AAGATTGAAC AACTGAGTGG TAAGGAGATT
TGGGTTCGTG CTAGCTCAAG CTATTTTGAG AGCATTCAAG CCTTAAATAA AAAGCTCAAC
AAGAAAGGCT TGCCCCCAGT TGTGGTGCAT TTTATCGAAG AAACACTACA AGATTACGAA
TTGGTGGGGA TGCTAAACAA TGGCTACGTC AAAGCCATCG TACTGGATAG TCACAAAGCC
AAGCTGTGGA TGAACTTTAT GGGTGGCATC CGTGCGCACA CCAAGATTCC TATTCGCAAA
GGCGGCGAGA TCGCTTGGGC CATGCGCCAC GACAGTCCTG AGTTAATGAA GGTCGTAAAT
AAGTTCATTC GTACCGCCAA ATCCGGAACC TTACTTGGCA ACGTCATTTA CGGTAAATAC
ATCGACAATA CCAATTGGCT CAATAAAGCG CTCAACCCAA AAAAGATTGC TCAACTCGAA
AAACTCTCTT CTTTATTTTC TAAGTATGGG GAGAAATATG ATTTCGATTA TCTGCTCATT
GCTGCGGTAG CGTATCAAGA GTCTGGGTTC GACAACAACT TAGCCTCCAG TCGTGGAGCA
GTCGGCATCA TGCAGATCTT ACCAAGTACA GCAAGCGACC CTAATGTAAA CATTAAGAAC
ATTCGTAACT TAGAAAATAA TGTCCATGCG GGCGTAAAAT ACATGGCCTT TCTACGTCGC
TATTACTTCA GTGATGGTGC CATCAGTAAA GAGAATAAGC TCTATTTAAC GTTAGCGGCA
TACAATGCGG GACCAGGGAA TATAGAGAGA ATGCGTAAGC GCGCGGCTCA ACAAGGCTAC
GATCCGAATG TCTGGTTCAA TAATGTGGAA GTGGTTACGC GACGAAGTTT AGGAGAAACC
GTCAGGTACG TAACCAATGT GAACCGCTAC TACGTGATCT ACAAACAGTT AGAAAGCCTT
GATCTGGCGA AAACGCTCGA CAACGTTCTA CTCGTGCCAG ATGACCCCAT CTTTATGACT
CCCTTACGAA GAGTCAGTCA AACGCCCTAA
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| Protein sequence | MDVNVTLSKL WAGLLILLST SSFALELSPL RQPPYTGDLD IIKEKNVLRV LVSADLGFYY
IEGGEPKGIG AELLAHFEKD LRKLKPKINI QIIPVSRDQL LPSLEQGLGD LVVANLTITD
ARKKSVSFSD PVITGIQEWV VTDKDTPAMT KIEQLSGKEI WVRASSSYFE SIQALNKKLN
KKGLPPVVVH FIEETLQDYE LVGMLNNGYV KAIVLDSHKA KLWMNFMGGI RAHTKIPIRK
GGEIAWAMRH DSPELMKVVN KFIRTAKSGT LLGNVIYGKY IDNTNWLNKA LNPKKIAQLE
KLSSLFSKYG EKYDFDYLLI AAVAYQESGF DNNLASSRGA VGIMQILPST ASDPNVNIKN
IRNLENNVHA GVKYMAFLRR YYFSDGAISK ENKLYLTLAA YNAGPGNIER MRKRAAQQGY
DPNVWFNNVE VVTRRSLGET VRYVTNVNRY YVIYKQLESL DLAKTLDNVL LVPDDPIFMT
PLRRVSQTP
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