Gene VIBHAR_00887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00887 
Symbol 
ID5555945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp879032 
End bp879511 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content48% 
IMG OID640906381 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001444114 
Protein GI156973207 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTG CAAAAATGAC TGCTCGCCGC CCGTACATGC TTCGCGCATT TTACGATTGG 
CTAGTAGACA ACGACTTAAC TCCGCACTTG GTTGTAGATG CAACTATGCC AGGTGTGCGT 
GTACCAGTTG AGTTTATTCA AGATGGTCAA ATCATTCTGA ATATTGCTCC ACGTGCTGTT 
GGTCAACTTG AGTTGGGTAA TGATGCGATT ACCTTCCATG CCCGCTTTAG TGGTCGCCCA 
CATTCAGTGA TCGTGCCCGT GTACGCTGTA CAAGCGATTT ACGCACGTGA AAATGGCGCT 
GGTACCATGT TTGAACCGGA AGAAGCGTAC ACTCACATTG AAGAAGAAGG CATTGTTGAA 
GAAGAACAAT CGCCGACTTT CACTACCGTG AGTGACGAAT CAGAAAGCGT GGACTCGGAG 
TCTGAAGAGG AAGAAGCGCC ACGCCCGAAA GGCAGACCAA GCTTACGAGT TATCAAATAA
 
Protein sequence
MDIAKMTARR PYMLRAFYDW LVDNDLTPHL VVDATMPGVR VPVEFIQDGQ IILNIAPRAV 
GQLELGNDAI TFHARFSGRP HSVIVPVYAV QAIYARENGA GTMFEPEEAY THIEEEGIVE 
EEQSPTFTTV SDESESVDSE SEEEEAPRPK GRPSLRVIK