Gene VIBHAR_00852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00852 
Symbol 
ID5554097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp840654 
End bp841715 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content49% 
IMG OID640906346 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_001444079 
Protein GI156973172 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCCA AATTTCCTCT ATATAGAAAG CATACTGAGA AAACCATGCG CATTATTGGT 
ATTGAAACCT CTTGTGACGA GACTGGCATC GCGATTTATG ACGATAAAAA AGGTCTGCTA 
TCACACAAGC TTTACAGCCA AGTAAAACTT CACGCAGATT ACGGCGGCGT GGTGCCTGAG 
TTGGCTTCAC GTGACCATGT TAAGAAAACC ATCCCTCTTA TTAAAGAGGC ACTGAAAGAA 
GCAAATCTGA CTTCTAAAGA CATTGACGGT GTAGCATACA CGGCAGGTCC AGGTTTGGTG 
GGCGCACTCC TTGTTGGTGC TACCATCGGT CGCAGTATTG CTTACGCTTG GGGTGTACCA 
GCGGTGCCTG TTCACCACAT GGAAGGTCAC CTACTGGCGC CTATGCTAGA AGATAATCCA 
CCACCGTTCC CATTTGTGGC GGTATTGGTA TCGGGTGGTC ACTCAATGAT GGTGGAAGTA 
AAAGGCATCG GCGAGTACAA AATCCTAGGC GAATCAATTG ACGATGCGGC GGGTGAGGCA 
TTCGATAAGA CGGCGAAGCT AATGGGCTTA GATTACCCAG GTGGTCCGCT GCTTTCTAAG 
CTAGCTGAAA AAGGCACACC GGGTCGCTTT AAATTCCCAC GTCCAATGAC GAATGTACCA 
GGCTTGGACA TGAGTTTCTC TGGTCTAAAA ACCTTTACGG CTAACACGAT TGCTGCCAAC 
GGTGATGATG AGCAAACACG TGCAGATATC GCTTTAGCAT TCGAAGAAGC GGTATGTGCT 
ACGCTGGCTA TCAAATGTAA GCGCGCACTT GAGCAAACGG GTATGAAACG CATTGTTATT 
GCTGGTGGTG TAAGTGCGAA CCGCCGTCTG CGTGCAGAGC TTGAGAAGCT GGCGAAGAAA 
GTTGGCGGCG AAGTTTACTA CCCACGCACT GAGTTTTGTA CCGATAACGG TGCGATGATC 
GCTTACGCAG GTATGCAACG TTTGAAGAAC GGCGAGGTGG CTGATATGTC AGTTGAAGCT 
CGCCCACGTT GGCCGATCGA TCAACTAACA CCAATCGCGT AA
 
Protein sequence
MTPKFPLYRK HTEKTMRIIG IETSCDETGI AIYDDKKGLL SHKLYSQVKL HADYGGVVPE 
LASRDHVKKT IPLIKEALKE ANLTSKDIDG VAYTAGPGLV GALLVGATIG RSIAYAWGVP 
AVPVHHMEGH LLAPMLEDNP PPFPFVAVLV SGGHSMMVEV KGIGEYKILG ESIDDAAGEA 
FDKTAKLMGL DYPGGPLLSK LAEKGTPGRF KFPRPMTNVP GLDMSFSGLK TFTANTIAAN 
GDDEQTRADI ALAFEEAVCA TLAIKCKRAL EQTGMKRIVI AGGVSANRRL RAELEKLAKK 
VGGEVYYPRT EFCTDNGAMI AYAGMQRLKN GEVADMSVEA RPRWPIDQLT PIA