Gene VIBHAR_00827 details

Gene Information

• Locus tag: VIBHAR_00827
• ID: 5554374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 814044
• End bp: 815924
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640906321
• Product: hypothetical protein
• Protein accession: YP_001444055
• Protein GI: 156973148
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGTCA GGAAGTTAGT CAGCGCCTTG CTGGCGACGA CGCTATTTTT TAGCGCGCTC 
ATCTCAATCT ACTACTACCA GAAATATCAA ACTCTGCTAG CGAGTAACGT CAAGAATACC 
GCGAAAGAGG CCCTCCACCA GTTAGCTTAC TCTGAGCGCG AATATAACAA CGTTCAAGAT 
CAGATCTCCT CCATCAGCGA TCTTCTCGGT CACAGCCAAA GCCTTTACGA CTACTTGCGT 
CATCCAAATC CAAAGAATCT CGCCATCTTA GAAGAGGTGT GGAGTTCGGT TGCCGTTAAC 
CAAAAATGGT ACCGACAAAT CCGTTTTCTT AACCTCGAAG GTCGAGAGAA TGTACGGATT 
CATTACGATT TCAAAACTGG AACGGCCGCT GCAGCCCGCA CGCTACAAGA CAAATCAGAC 
CGAGAATACT TCCAATATGT GCAGAATCTG GAAAATGATC AGATTGGCTC TTGGGGGATC 
GAGCTAGAGC GAGAAAATGG TACGCTTGTG TATCCTTACA GACCATCGGT TCGCATTATG 
ATGCCGGTCG CAATGGATGG TGTGCGTGAA GGTTACCTAG TGTTGAACAT TGATGTGCAA 
TACCTTTCGT CTCGCTTGAA CTACTCACCG GTCAGAGACT TCAATATTGA GCTGCTCAAT 
CAAGCGGGTT ACTACGTTGC AAGCCCATAC TCTGGAAAAC TGTATGGCGA TATTATTCCA 
GATCGCTCTC GATTTAATTT TGGCTTATTG CAACCCGATG TTTGGCAAAA CATGGGCTCA 
GAGAAGATGG GCTATGAGTA CAACGGTAAA AACCTGACTG TATTCAATGC GATTGCCTTC 
GTACCAGGCG AGCCTCTCCA CTTAATTATC GATCTTTCGC AAGAACAACT GCTCGAGAGA 
GCGGATCGTG ATATTGATGA CTTAGTCCAA GAAGCGTTTT TTGTGCTCAG TTTAATGCTG 
GTGTTTGCAC TTCCGATTAC CTCTCTTGCA CTGCATTACC GTCGTCATAG TATCGAGTCT 
ATATTAGCGA GAGCTGCGCT AGATGGGATG ACTGCCGTCG TTATTTCAGA TACTTCACAC 
CGCATTATGA TGGTGAACCA GGAGTTTGAA AACATGATGG GTTATTCATC TTCTCGATTA 
CGAGGTTGGA ACGCCCATAA TCTGATTTTT ATTCCTGAAG ACCTAGAAAA CATTCTCGCG 
ATTTGGAACA AACTGGGCGT TGAGCAAGTA TGGGAAGGGG AAGTGCGTTG CCGTACTAAG 
CTTAATCATG TGTTTACGGC CATTATGCGT ATTCAGGCCA TTATGGCGAA GTCGGGTAAA 
GTCAGTTATT ACATAACCTC TTTAGTGGAC ATCTCAGAGC GTAAAGAGCT GGAAGAAAAG 
TTGCGTAACT TAAGTGAACG TGACGGATTA ACCAACCTTT GGAATCGGCG TAAGTTTGAA 
GAGCAACTGT CTCAGCATGC CAATATGCTA GAGCGTTATC CGAATACGCC AACCACTTGT 
TTAGCGCTGT TTGATATTGA CTATTTTAAA CGTATCAACG ATGAGATGGG CCATGATGAA 
GGAGACCGAG TCATCTGCAG CGTGGCGGAA ACATTACTCA GCGGAGTAAG GAATACTGAC 
TTCGTTGCTC GTGTTGGTGG TGAAGAGTTT GCAGTGCTCA TGCCGCACAC GACGATAGAA 
GAAGCGGAAG TGGTATTAAA TCGCTTGAGA GTTGCTGTCG AGTTGAGTGG TGACGGCTCA 
GTGACAGTAA GTGTTGGTTA TAGTGATTTA ACTTCCGATC GCACTCGTAG CTATAAGTGC 
GCAGATATTG CCCTGTACGA ATCAAAAAGT GCAGGGCGTA ACCGAGTGTC TATTTGTCAC 
AGTTTCGATG ACATTGCTTA G 

 

Protein sequence

MKVRKLVSAL LATTLFFSAL ISIYYYQKYQ TLLASNVKNT AKEALHQLAY SEREYNNVQD 
QISSISDLLG HSQSLYDYLR HPNPKNLAIL EEVWSSVAVN QKWYRQIRFL NLEGRENVRI 
HYDFKTGTAA AARTLQDKSD REYFQYVQNL ENDQIGSWGI ELERENGTLV YPYRPSVRIM 
MPVAMDGVRE GYLVLNIDVQ YLSSRLNYSP VRDFNIELLN QAGYYVASPY SGKLYGDIIP 
DRSRFNFGLL QPDVWQNMGS EKMGYEYNGK NLTVFNAIAF VPGEPLHLII DLSQEQLLER 
ADRDIDDLVQ EAFFVLSLML VFALPITSLA LHYRRHSIES ILARAALDGM TAVVISDTSH 
RIMMVNQEFE NMMGYSSSRL RGWNAHNLIF IPEDLENILA IWNKLGVEQV WEGEVRCRTK 
LNHVFTAIMR IQAIMAKSGK VSYYITSLVD ISERKELEEK LRNLSERDGL TNLWNRRKFE 
EQLSQHANML ERYPNTPTTC LALFDIDYFK RINDEMGHDE GDRVICSVAE TLLSGVRNTD 
FVARVGGEEF AVLMPHTTIE EAEVVLNRLR VAVELSGDGS VTVSVGYSDL TSDRTRSYKC 
ADIALYESKS AGRNRVSICH SFDDIA