Gene VIBHAR_00814 details

Gene Information

• Locus tag: VIBHAR_00814
• Symbol: leuD
• ID: 5556423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 796507
• End bp: 797109
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640906308
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001444042
• Protein GI: 156973135
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGGCT TTAAACAACA CACAGGCTTA GTTGTTCCTC TAGATGCAGC GAACGTAGAT 
ACTGATGCCA TCATTCCAAA GCAGTTCCTG CAAAAGGTCT CTCGCCTAGG GTTTGGTAAG 
CACCTATTTC ATGACTGGCG TTTCCTAGAC GATGTTGGCG AACAACCGAA CCCAGAGTTC 
GTGATGAACG CACCTCGCTA CCAAGGTGCT TCTATCTTGC TAGCGCGTGA AAACTTCGGT 
TGTGGTTCTT CTCGTGAGCA CGCACCGTGG GCACTGGCGG ATTACGGTAT CAAAGCGATG 
ATCGCACCAA GCTTTGCCGA TATTTTTTAC GGTAACTCGA TCAACAACCA AATGGTGCCA 
GTTCGTTTGA CTGAGCAAGA AGTGGATGAA ATCTTCCAGT TTGTTGAGGC TAACGAAGGC 
GCAGAAGTAG AAGTGGACCT AGAAGCGAAT GTGGTTCGCG CCAACGGCAA AGAATATGGT 
TTTGAAATCG ATTCGTTCCG TCGTCACTGC CTGCTAAACG GTTTGGACAA TATCGGTCTT 
ACCCTTCAAC ACGAAGACAA GATTGCCGAG TACGAGGCGA ATATCCCGAG TTTCTTGAGC 
TAA 

 

Protein sequence

MSGFKQHTGL VVPLDAANVD TDAIIPKQFL QKVSRLGFGK HLFHDWRFLD DVGEQPNPEF 
VMNAPRYQGA SILLARENFG CGSSREHAPW ALADYGIKAM IAPSFADIFY GNSINNQMVP 
VRLTEQEVDE IFQFVEANEG AEVEVDLEAN VVRANGKEYG FEIDSFRRHC LLNGLDNIGL 
TLQHEDKIAE YEANIPSFLS