Gene VIBHAR_00754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00754 
Symbol 
ID5555485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp734265 
End bp735257 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content46% 
IMG OID640906248 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_001443982 
Protein GI156973075 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGTT CTGTAACAGA ATTTCTTAAG CCACGTCTAG TTGACATCGA ACAAATCAGC 
TCGACTCACG CAAAAGTAAC TCTTGAGCCA TTAGAGCGTG GCTTTGGTCA TACTCTGGGT 
AATGCACTTC GCCGTATTCT TCTATCTTCT ATGCCAGGTT GTGCTGTAAT AGAAGTAGAA 
ATCGAAGGCG TACTTCATGA GTACAGCACT AAAGAAGGCG TTCAAGAAGA TATTCTTGAG 
ATTCTTCTAA ACCTTAAAGG TTTGGCTGTA CGCGTTGCCG AAGGCAAAGA TGAAGTGTTC 
ATTACTTTGA ACAAATCAGG CTCGGGCCCT GTGGTTGCAG GTGACATCAC CCATGACGGT 
GATGTAGAGA TCGCTAACCC TGAACACGTT ATTTGTCACC TAACGGATGA CAACGCTGAG 
ATCGCAATGC GTATCAAAGT AGAACGTGGT CGTGGTTATG TTCCAGCTTC TGCGCGTATC 
CATAACGAAG AAGATGAGCG TCCAATCGGT CGCCTACTAG TAGATGCTAC TTACAGCCCT 
GTAGACAAAA TTGCCTACGC TGTAGAAGCA GCTCGTGTAG AGCAGCGTAC AGATCTAGAC 
AAGCTTGTTA TCGATATGGA AACGAACGGT ACTCTAGAAC CTGAGGAAGC AATCCGTCGT 
GCAGCTACTA TCCTAGCTGA ACAATTGGAT GCGTTCGTAG ATCTTCGTGA TGTACGTGTA 
CCTGAGGAGA AGGAAGAGAA GCCAGAATTC GATCCGATCC TACTGCGTCC TGTAGACGAT 
CTTGAACTAA CAGTTCGCTC TGCTAACTGT CTGAAAGCAG AAGCGATTCA CTACATCGGT 
GATCTAGTAC AACGTACTGA GGTTGAGCTA CTTAAAACGC CTAACCTTGG TAAAAAATCT 
CTTACTGAGA TTAAAGACGT ACTTGCGTCA CGTGGTCTGT CTCTGGGCAT GCGCCTAGAA 
AACTGGCCAC CTGCATCAAT CGCTGAAGAT TAA
 
Protein sequence
MQGSVTEFLK PRLVDIEQIS STHAKVTLEP LERGFGHTLG NALRRILLSS MPGCAVIEVE 
IEGVLHEYST KEGVQEDILE ILLNLKGLAV RVAEGKDEVF ITLNKSGSGP VVAGDITHDG 
DVEIANPEHV ICHLTDDNAE IAMRIKVERG RGYVPASARI HNEEDERPIG RLLVDATYSP 
VDKIAYAVEA ARVEQRTDLD KLVIDMETNG TLEPEEAIRR AATILAEQLD AFVDLRDVRV 
PEEKEEKPEF DPILLRPVDD LELTVRSANC LKAEAIHYIG DLVQRTEVEL LKTPNLGKKS 
LTEIKDVLAS RGLSLGMRLE NWPPASIAED