Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00642 |
Symbol | |
ID | 5556070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 632145 |
End bp | 633002 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906137 |
Product | ABC transporter ATPase component |
Protein accession | YP_001443871 |
Protein GI | 156972964 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACG ATGTAATCCT GAGTGTTAAA GACCTAGAAG TGGAATTCAC TACTGATGAC GGCCCAGTGA AAGTACTGCA TGGCGTGAAC TTTGATGTTC GCGCTGGGCG TACCCTTGGC CTAGTAGGCG AATCGGGCAG TGGTAAGAGT GTGACCTCCA TGTCCATCAT GGGTTTGCTG CCGAAACCTT ACGGTAATAT CGTCAATGGT GAGGTTGATT ACCGCGGTAC AAACTTGGTG ACACTGCCGG CAGAAGAAAT GTATGCCATG CGCGGTGATC GCATTTCAAT CATCTTCCAG GATCCAATGA CGGCGCTTAA CCCAGTGCAC TCTATTGGTC GTCAGCTTTG TGAGGTGCTA GAGCTACACC GTCCTGAGTT GGATAAGAAA GAACGTGAAG CTTACGCCAT TGAAATGTTG GCGAAAGTGA AAATCCCAAT GCCAGAAAAG CGCTTGAATG AGTATCCACA CAATCTGTCT GGCGGCATGC GTCAGCGTGT GATGATCGCC ATGGCGTTGG CGTGTAAGCC CGATATTCTG ATTTGTGATG AGCCAACCAC TGCACTGGAT GTAACGGTAC AGGCGTCTAT TCTTGAACTA ATGAACGAGC TGCAAGAAGA AACGGGCATG GCGATGATCT TCATTACCCA CGATCTTGGT GTAGTTGCTG AAGTGTGTGA TGACGTGGCG GTGATGTATG GTGGTCGTAT TGTTGAAAAG GCAGAGATTT TCGAGCTATT CGATAACCCG CAACACCCAT ACACTGAACG TTTGATGGGC TTGATGCCAA GCTTAGATAA CGAGCCTAAG CAAATGATCG ACATTAAACC GATCGATGCC AGCATGTTTG CTAGCTAA
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Protein sequence | MENDVILSVK DLEVEFTTDD GPVKVLHGVN FDVRAGRTLG LVGESGSGKS VTSMSIMGLL PKPYGNIVNG EVDYRGTNLV TLPAEEMYAM RGDRISIIFQ DPMTALNPVH SIGRQLCEVL ELHRPELDKK EREAYAIEML AKVKIPMPEK RLNEYPHNLS GGMRQRVMIA MALACKPDIL ICDEPTTALD VTVQASILEL MNELQEETGM AMIFITHDLG VVAEVCDDVA VMYGGRIVEK AEIFELFDNP QHPYTERLMG LMPSLDNEPK QMIDIKPIDA SMFAS
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