Gene VIBHAR_00604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00604 
Symbol 
ID5554594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp591214 
End bp591654 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content46% 
IMG OID640906099 
Productgeneral secretion pathway protein G 
Protein accessionYP_001443833 
Protein GI156972926 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA AACGCAGTAA ACAACAAGGC TTTACACTTC TAGAAGTGAT GGTTGTTGTC 
GTTATCCTAG GTATTTTGGC AAGTGTGGTT GTTCCTAACC TACTAGGCAA CAAAGAAAAA 
GCAGACCAAC AAAAAGCGAT TACTGACATC GTGGCGTTGG AGAATGCGTT GGACATGTAC 
AAGCTGGATA ATAGTGTTTA CCCAACAACG GACCAAGGTC TAGATGCATT GGTGAACAAA 
CCTTCTAACC CAGAGCCGCG CAACTACCGT GACGGTGGTT ACATCAAGCG TCTTCCATCT 
GATCCATGGA GCAACGAGTA CCAATACCTA AGCCCTGGCG ACAATGGCAC GATTGATATC 
TTTACTCTAG GCGCTGACGG CCAAGAGGGC GGTGAAGGTC CAGCTGCAGA TATCGGCAAC 
TGGAACATGC AAGATTTCTA A
 
Protein sequence
MKFKRSKQQG FTLLEVMVVV VILGILASVV VPNLLGNKEK ADQQKAITDI VALENALDMY 
KLDNSVYPTT DQGLDALVNK PSNPEPRNYR DGGYIKRLPS DPWSNEYQYL SPGDNGTIDI 
FTLGADGQEG GEGPAADIGN WNMQDF