Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00538 |
Symbol | |
ID | 5552940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 516987 |
End bp | 518735 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640906033 |
Product | hypothetical protein |
Protein accession | YP_001443768 |
Protein GI | 156972861 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGACTG AGCCAACCTA TCTATCTGAC TGGAGAGCTG AGTTTTGCAT TCAACTTGAT GTGAGAAGCA ACCTCCTAGC AGACTTTAAC CGCCTTTTAT TTAAAGGTTT TCCTCCAACT AAAAAACTTC AACAATGTCA TCAATTCGAA GATGCCTCTC GCAAGGAGAT CGTTCTTAAG TTACAAGACA GATTTATTGA AAAAATTGAT GAAGGGTTTA GCCATATTTT TCTATATGGC ATTTTTATGG AGACATCTAG GTTTTTTCGT TGGTGCGATG AAAACGATAG AGAAGTTTCT AGTCAAAATT CTCTCGAAAA CTACATGACT CACCTACAAA CTCGAGTCAG GTTAGGAGAG ATAAAAAAAA GCACATATAA GACCAAACAT TCGAATATGG TTGCGCTATT TACTCGATAC TTTGATTTAC CGAGCTACTA TTTTAATAAC GTAGTGATCA TGGACAGTAG CGATAGGGAG TCATTTGAGA GTTATACTCG TAGTGATCTA AACCAACTCC TTCCTTTTCT AAGACGTATT TTCAATCAAA CCTATTCACA GTTTATTGCT GAGCCCCAAA AACATATTTA TGCGTATAAA CGTACTCCAA CGATGATCTT TGAGTGGCGA GGCATGGAGT ATCAAATTTG TGGTGGCATA TCCAAGATGA TGAGTGCAGC TACTTACCTA CTAGCTTATT ACACTTATGC CAACACCAGT GATCTATTTA GGTTGAAGCA GCCTAATAAT GCATCAACAT CAACAGTTGA AACATGGTAC ACAATGCCCG CCTTTAAGCG TCGAGCATTC AAAACCATTG TTGTCGAGAT CGGAGATCAC GAACTAGAAA TACCGAAATA CGCAACAACC TTTTTCGACA AGTTACTCAA CGCATCTCGA ATAATTAGTA CAAATGAAAG TGCGACTCTA TTGCAAACTA TTGCATCTCA AAAGGTTCAA CCCCTCCATA GTCCAACGCT ACAGGCATTC ATAAAAAATT GGGTCGAAAA AAACTTTTCC TTCACAGACC AAGCAGGAAG GCGCTTACGT CCTAGTATTA GCCGATTTCG TGAAACTGGT GCTCAAATAA CCGCTTACCA TCAGGGGGAA ATTGTTAATA ACCTTATGCT CAACAACAAT CCAAACACCC GTAGACACCA CTACAGTGAA GGAAATAAAT CAGCAAATAA GGGTATGATG CAAGATACGA TGTTAATTCG GGAGGAACAG GTCAAGAACA GGGTCAGCAC CCTGCAAGCT CAGGAAAACC TCAATATTGA AGTGTTGGTC ATCAAGGAAG AGAACAAGGT TAACCTTCCA CATTTAAGCC GTACCTCTAA TGGCGGTAGC TGCGCTTCCC CATTCGGTGA AAAGTCTAAA AAGTACACTA AGAAAGCCCA AACCCAGGGA CTTGCTAGGG AAGGAGAACG ATTAGCATGT GCAGACCTAT TAGGGTGCTT TGGTTGTCCT GACCAAGTGA TTGTACAGTC TGTCTCAGAT ATCTGGTGCC TGCTCTCATT CAAAGCTTGT ATTGAGGAAT CACTGTTCGT TCATTTGGAT GCCAGCCATT ACCAAACAAA CTTTGAAAGC ATCGTACAGT TCATAGAGCA AAAAATTCTG CCGAGTATAA ATAAACAGAT ATTGAGACAG GCAGAAACCA AACTTGATGA TGATGGTCTG CACCCCGCAT GGAGCGACAG CGAGTCAGTC TTAAATTTAA TTCCAAAATC ACCAGTCGAG GTAGGATAA
|
Protein sequence | MMTEPTYLSD WRAEFCIQLD VRSNLLADFN RLLFKGFPPT KKLQQCHQFE DASRKEIVLK LQDRFIEKID EGFSHIFLYG IFMETSRFFR WCDENDREVS SQNSLENYMT HLQTRVRLGE IKKSTYKTKH SNMVALFTRY FDLPSYYFNN VVIMDSSDRE SFESYTRSDL NQLLPFLRRI FNQTYSQFIA EPQKHIYAYK RTPTMIFEWR GMEYQICGGI SKMMSAATYL LAYYTYANTS DLFRLKQPNN ASTSTVETWY TMPAFKRRAF KTIVVEIGDH ELEIPKYATT FFDKLLNASR IISTNESATL LQTIASQKVQ PLHSPTLQAF IKNWVEKNFS FTDQAGRRLR PSISRFRETG AQITAYHQGE IVNNLMLNNN PNTRRHHYSE GNKSANKGMM QDTMLIREEQ VKNRVSTLQA QENLNIEVLV IKEENKVNLP HLSRTSNGGS CASPFGEKSK KYTKKAQTQG LAREGERLAC ADLLGCFGCP DQVIVQSVSD IWCLLSFKAC IEESLFVHLD ASHYQTNFES IVQFIEQKIL PSINKQILRQ AETKLDDDGL HPAWSDSESV LNLIPKSPVE VG
|
| |