Gene VIBHAR_00538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00538 
Symbol 
ID5552940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp516987 
End bp518735 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content41% 
IMG OID640906033 
Producthypothetical protein 
Protein accessionYP_001443768 
Protein GI156972861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTG AGCCAACCTA TCTATCTGAC TGGAGAGCTG AGTTTTGCAT TCAACTTGAT 
GTGAGAAGCA ACCTCCTAGC AGACTTTAAC CGCCTTTTAT TTAAAGGTTT TCCTCCAACT
AAAAAACTTC AACAATGTCA TCAATTCGAA GATGCCTCTC GCAAGGAGAT CGTTCTTAAG
TTACAAGACA GATTTATTGA AAAAATTGAT GAAGGGTTTA GCCATATTTT TCTATATGGC
ATTTTTATGG AGACATCTAG GTTTTTTCGT TGGTGCGATG AAAACGATAG AGAAGTTTCT
AGTCAAAATT CTCTCGAAAA CTACATGACT CACCTACAAA CTCGAGTCAG GTTAGGAGAG
ATAAAAAAAA GCACATATAA GACCAAACAT TCGAATATGG TTGCGCTATT TACTCGATAC
TTTGATTTAC CGAGCTACTA TTTTAATAAC GTAGTGATCA TGGACAGTAG CGATAGGGAG
TCATTTGAGA GTTATACTCG TAGTGATCTA AACCAACTCC TTCCTTTTCT AAGACGTATT
TTCAATCAAA CCTATTCACA GTTTATTGCT GAGCCCCAAA AACATATTTA TGCGTATAAA
CGTACTCCAA CGATGATCTT TGAGTGGCGA GGCATGGAGT ATCAAATTTG TGGTGGCATA
TCCAAGATGA TGAGTGCAGC TACTTACCTA CTAGCTTATT ACACTTATGC CAACACCAGT
GATCTATTTA GGTTGAAGCA GCCTAATAAT GCATCAACAT CAACAGTTGA AACATGGTAC
ACAATGCCCG CCTTTAAGCG TCGAGCATTC AAAACCATTG TTGTCGAGAT CGGAGATCAC
GAACTAGAAA TACCGAAATA CGCAACAACC TTTTTCGACA AGTTACTCAA CGCATCTCGA
ATAATTAGTA CAAATGAAAG TGCGACTCTA TTGCAAACTA TTGCATCTCA AAAGGTTCAA
CCCCTCCATA GTCCAACGCT ACAGGCATTC ATAAAAAATT GGGTCGAAAA AAACTTTTCC
TTCACAGACC AAGCAGGAAG GCGCTTACGT CCTAGTATTA GCCGATTTCG TGAAACTGGT
GCTCAAATAA CCGCTTACCA TCAGGGGGAA ATTGTTAATA ACCTTATGCT CAACAACAAT
CCAAACACCC GTAGACACCA CTACAGTGAA GGAAATAAAT CAGCAAATAA GGGTATGATG
CAAGATACGA TGTTAATTCG GGAGGAACAG GTCAAGAACA GGGTCAGCAC CCTGCAAGCT
CAGGAAAACC TCAATATTGA AGTGTTGGTC ATCAAGGAAG AGAACAAGGT TAACCTTCCA
CATTTAAGCC GTACCTCTAA TGGCGGTAGC TGCGCTTCCC CATTCGGTGA AAAGTCTAAA
AAGTACACTA AGAAAGCCCA AACCCAGGGA CTTGCTAGGG AAGGAGAACG ATTAGCATGT
GCAGACCTAT TAGGGTGCTT TGGTTGTCCT GACCAAGTGA TTGTACAGTC TGTCTCAGAT
ATCTGGTGCC TGCTCTCATT CAAAGCTTGT ATTGAGGAAT CACTGTTCGT TCATTTGGAT
GCCAGCCATT ACCAAACAAA CTTTGAAAGC ATCGTACAGT TCATAGAGCA AAAAATTCTG
CCGAGTATAA ATAAACAGAT ATTGAGACAG GCAGAAACCA AACTTGATGA TGATGGTCTG
CACCCCGCAT GGAGCGACAG CGAGTCAGTC TTAAATTTAA TTCCAAAATC ACCAGTCGAG
GTAGGATAA
 
Protein sequence
MMTEPTYLSD WRAEFCIQLD VRSNLLADFN RLLFKGFPPT KKLQQCHQFE DASRKEIVLK 
LQDRFIEKID EGFSHIFLYG IFMETSRFFR WCDENDREVS SQNSLENYMT HLQTRVRLGE
IKKSTYKTKH SNMVALFTRY FDLPSYYFNN VVIMDSSDRE SFESYTRSDL NQLLPFLRRI
FNQTYSQFIA EPQKHIYAYK RTPTMIFEWR GMEYQICGGI SKMMSAATYL LAYYTYANTS
DLFRLKQPNN ASTSTVETWY TMPAFKRRAF KTIVVEIGDH ELEIPKYATT FFDKLLNASR
IISTNESATL LQTIASQKVQ PLHSPTLQAF IKNWVEKNFS FTDQAGRRLR PSISRFRETG
AQITAYHQGE IVNNLMLNNN PNTRRHHYSE GNKSANKGMM QDTMLIREEQ VKNRVSTLQA
QENLNIEVLV IKEENKVNLP HLSRTSNGGS CASPFGEKSK KYTKKAQTQG LAREGERLAC
ADLLGCFGCP DQVIVQSVSD IWCLLSFKAC IEESLFVHLD ASHYQTNFES IVQFIEQKIL
PSINKQILRQ AETKLDDDGL HPAWSDSESV LNLIPKSPVE VG