Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00366 |
Symbol | |
ID | 5553901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 352647 |
End bp | 354587 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640905860 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001443614 |
Protein GI | 156972707 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTC GCAAGCAAGC GAGACTGGAA GCAAAACAGT TCATTGATAC ACTCTCGGTA CAACCGTACC CTAATTCAAG CAAAGTCTAC GTAGAGGGTT CACGTCCTGA TATTCGTGTG CCAATGCGTG AAATATCACT CGCTGATAGC CTTATTGGAG GCACAAAAGA AGCGCCTATT TTCGAGCCTA ATGAGCCAGT ACGCGTTTAC GATACCTCGG GTGTATACAC AGATCCAGAA CACACCATTG ACCTCTACAA CGGCTTACCT AAGCTGAGAG AAGGGTGGAT TGAAGAGCGC TCCGATACTG AGCTACTTGA TGAAGTAAGC TCGGTGTACA CCAAAGAGCG CTTAGAAGAT GAAACGCTAG ACGATCTTCG TTACGGAAAT CTACCACGTA TTCGACGTGC CAAAGATGGG CAATGCGTGA CTCAATTGCA CTATGCTCGC CAAGGTATAA TCACCCCAGA AATGGAATAC ATCGCTCTAC GTGAAAATAT GGGGCGTGCT CAATACCGTG ATGAAGTGCT GAATCAACAA CATCCGGGTC AAAGCTTCGG AGCGAATCTT CCAAAAGACA TTACCGCCGA GTTTGTGCGT AAAGAAGTCG CCGAAGGTCG AGCGATTATC CCTTCCAATA TCAACCACCC AGAATCCGAA CCAATGATCA TTGGCCGTAA CTTTTTGGTC AAAGTGAACG CCAACATCGG TAACTCATCG GTCACTTCTT CGATTGAAGA AGAAGTAGAG AAGTTAGTAT GGGCAACGCG CTGGGGTGGA GATACCGTTA TGGATCTCTC TACTGGACGT AATATTCACG AAACTCGCGA GTGGATTCTA CGTAACAGTC CAGTTCCGAT CGGTACCGTA CCAATGTATC AAGCGCTTGA GAAAGTGAAT GGTGTGGCGG AAAACCTTAA CTGGGAAGTG ATGCGCGATA CTCTGATCGA GCAAGCAGAG CAGGGCGTTG ACTACTTCAC TATCCATGCC GGTTTACTAC TTCGTTATGT GCCAATGACT GCAAAACGTG TTACTGGTAT CGTCTCTCGT GGTGGCTCTA TCATCGCGAA ATGGTGTTTA GCGCATCACC AAGAAAGTTT CTTATATACC CATTTCCGAG AGATCTGTGA AATCTGTGCT AAGTATGATG TCGCAATATC TCTTGGTGAT GGTCTGCGTC CTGGCTCGGT TGCTGATGCT AACGATGAAG CGCAATTTGC AGAGCTTCGT ACTCTTGGCG AATTGACCAA GGTTGCGTGG GAATACGACG TACAGGTGAT TATTGAAGGC CCTGGCCATG TTCCAATGCA TATGATCAAA GAGAACATGG AAGAGCAGTT AGAGCACTGT CATGAGGCTC CTTTTTATAC CCTTGGTCCA TTGACGACAG ACGTCGCTCC TGGTTACGAC CATATTACTT CAGGCATCGG CGCTGCCATG ATTGGTTGGT ATGGCTGTGC AATGCTTTGC TACGTAACTC CGAAAGAGCA CCTTGGTTTA CCAAACAAAG AAGATGTGAA AGTAGGCATG ATCACTTACA AGCTTGCCGC GCACGCCGCT GATTTAGCGA AGGGACACCC TGGTGCACAA GTTCGTGATA ACGCGCTTTC TAAAGCTCGC TTCGAGTTCC GTTGGGAAGA CCAATTTAAC TTGTCGCTCG ACCCAGATAC TGCTCGTGCT TTCCATGATG AAACCTTGCC TCAAGAGTCT GGAAAAGTTG CTCACTTCTG TTCGATGTGC GGACCAAAGT TCTGCTCCAT GAAGATTTCG CAAGAAGTCC GAGAATATGC GAAAGACACT GAGCAAGTTG CTGCGGACCA AGCTATCTCA ATCAAAATGC TAGATGATCC TCTTGAGGGG ATGCGTCAGA AATCGCAAGA ATTTAGAGAC ACAGGTTCTG AGTTATACCA CCCAGCAGCA TATGCCGAGG TAAGTGACTG A
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Protein sequence | MSSRKQARLE AKQFIDTLSV QPYPNSSKVY VEGSRPDIRV PMREISLADS LIGGTKEAPI FEPNEPVRVY DTSGVYTDPE HTIDLYNGLP KLREGWIEER SDTELLDEVS SVYTKERLED ETLDDLRYGN LPRIRRAKDG QCVTQLHYAR QGIITPEMEY IALRENMGRA QYRDEVLNQQ HPGQSFGANL PKDITAEFVR KEVAEGRAII PSNINHPESE PMIIGRNFLV KVNANIGNSS VTSSIEEEVE KLVWATRWGG DTVMDLSTGR NIHETREWIL RNSPVPIGTV PMYQALEKVN GVAENLNWEV MRDTLIEQAE QGVDYFTIHA GLLLRYVPMT AKRVTGIVSR GGSIIAKWCL AHHQESFLYT HFREICEICA KYDVAISLGD GLRPGSVADA NDEAQFAELR TLGELTKVAW EYDVQVIIEG PGHVPMHMIK ENMEEQLEHC HEAPFYTLGP LTTDVAPGYD HITSGIGAAM IGWYGCAMLC YVTPKEHLGL PNKEDVKVGM ITYKLAAHAA DLAKGHPGAQ VRDNALSKAR FEFRWEDQFN LSLDPDTARA FHDETLPQES GKVAHFCSMC GPKFCSMKIS QEVREYAKDT EQVAADQAIS IKMLDDPLEG MRQKSQEFRD TGSELYHPAA YAEVSD
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