Gene VIBHAR_00273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00273 
Symbol 
ID5554987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp266551 
End bp267090 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content47% 
IMG OID640905768 
Productchorismate lyase 
Protein accessionYP_001443528 
Protein GI156972621 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CGACATCACT CTATCTTGCT TCTTTATTGG AAGTAGAGTG GCAAAACCCC 
GAAGATTTTG AATTCCCTAA CGAATTCGCT CAGCATTGGC TTGAAGAACA GGGCTCTTTG 
TCACGTCGTT TAGGCCAGCA TTGCCAACAC TTAACGGTGG AATTGCTGCA CAATCAGATC 
GTCACAGCCA AGACGTTAAA ACAGGATGAG AGCCAGCTAT TGTCTGAGCA AGATTGCCTA 
CTGAGAGAGG TGATTTTATG TGGCGACAAT ACGGATTGGG TCATTGGCCG CACGCTCATT 
CCTCGTTCAA CCTTGGTCGA TCAACAATAT GACTTAGCTC AGCAAGGAGA TATTCCGCTG 
GGCTTAACTG TGTTCAGCGC CGATAACGTT GAACGCGATG CTCTGCAAAT GGGATGGGTT 
AATTTGCCAC AGGGACGCTT TTTAGCGCGA CGCTCGAGAC TGTGGATGAA TCACAAACCC 
ATGCTGGTTG CTGAGTTATT CTTACCAAAT TCACCTGTTT ACGCTAAGGA GAAGGTGTAA
 
Protein sequence
MNQPTSLYLA SLLEVEWQNP EDFEFPNEFA QHWLEEQGSL SRRLGQHCQH LTVELLHNQI 
VTAKTLKQDE SQLLSEQDCL LREVILCGDN TDWVIGRTLI PRSTLVDQQY DLAQQGDIPL 
GLTVFSADNV ERDALQMGWV NLPQGRFLAR RSRLWMNHKP MLVAELFLPN SPVYAKEKV