| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00216 |
|---|
| Symbol | |
|---|
| ID | 5553889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 215548 |
|---|
| End bp | 216471 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640905712 |
|---|
| Product | phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_001443483 |
|---|
| Protein GI | 156972576 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATC CAAATCAGAT TTTCCTGCTC TCAGAGCATC GCGACACCTA CGAAACGTTA
CTGGCAGAGA AAAATCTGCC CGATCTTTGC CTCACCGACC AACCTGAAGA AGCTCAGATC
GTACTGGCGG ATCCACCATT ACTACCACAA AGGTTAGACG AGTTTTCACA GCTTGAGTGG
GTGCAATCCA CATTTGCGGG GGTGAACGCT TTAATGTCAC CGGATCTGCG CCAAGATTAC
ACTCAGACCA ACATACGCGG TATTTTCGGC CCATTAATTG CCGAGTACGT AATTGGCTAC
TGCATTGCTC ACTTCCGCCA CTTTATGCAA TACCACCAGC AACAGCAGAA CAAGCAGTGG
CAACCGCATC TGTACACCTC GCTGCAAAAC AAAACCATGG TGATTCTTGG TACAGGCAGC
ATAGGTAGCC ACTTGAGTAA AGCGGCACAA TTGATGGGCA TGAAAACCGT AGGGATCAAT
CGTACTGGTA TCCCAACTTC TGGTGGCGAA TTTACTCAAA CCTTTCATAT CAATGAACTG
GCAAGCGCAT TTCATCAAGC GGACATTGTG GTAAATACAC TGCCGAGCAC GCCAGACACT
CAACGCTTAC TCAACAGCGA GGTGCTAAGC CACCTTAATC AGGCACTGTT ATTTAATGTC
GGAAGAGGTG ATGTGATTGA TGATACTGGT CTATTGCTCG CGCTCAAGAA TCGTTGGGTC
GAACATGCTT TTCTCGATGT GTTTGAACAA GAGCCACTCT CACCGCAACA TCCTTTTTGG
AAACTTCCGC AAGTAACCAT CACACCCCAC ATCGCAGCAT TGAGTTTCCC TGAGCAAGTG
GTCGACATTT TTGCAGACAA CTACTTGAGT TGGCGAGACG GGTTCTCTCT AAATAATCAG
GTCGATTTCG ATAAAGGGTA TTAA
|
|---|
| Protein sequence | MQHPNQIFLL SEHRDTYETL LAEKNLPDLC LTDQPEEAQI VLADPPLLPQ RLDEFSQLEW
VQSTFAGVNA LMSPDLRQDY TQTNIRGIFG PLIAEYVIGY CIAHFRHFMQ YHQQQQNKQW
QPHLYTSLQN KTMVILGTGS IGSHLSKAAQ LMGMKTVGIN RTGIPTSGGE FTQTFHINEL
ASAFHQADIV VNTLPSTPDT QRLLNSEVLS HLNQALLFNV GRGDVIDDTG LLLALKNRWV
EHAFLDVFEQ EPLSPQHPFW KLPQVTITPH IAALSFPEQV VDIFADNYLS WRDGFSLNNQ
VDFDKGY
|
|---|
| |