Gene VIBHAR_00168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00168 
Symbol 
ID5555278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp170896 
End bp171528 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content48% 
IMG OID640905664 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001443443 
Protein GI156972536 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGC TACAAAGGAA ATACTGGCAT TACAAACTGA AGGGCTCACC TTATCAGCCA 
CTGTTTTGTT CGCCGCAAAA AGGTGAGTTT GTCTCTCTCG ATTGCGAAAC CACCAGCTTG 
GACCCAAATA GAGCCGAGCT GGTCACCATC GCTGCGACCA AAATCATCGA TAATCGCATC 
ATCACCAGTA AACCGTTCGA AGTTCGACTG CGCGCCCCGC AATCACTCGA TTCAGGTTCA 
GTGAAAATTC ACCATATCCG CCACCAAGAT TTGGTGGATG GCATCAGCGA AAAAGAAGCA 
CTCATCAAGC TGCTCGACTT TATCGGCAAT CGTCCTTTAG TTGGCTACCA CATTCGCTAC 
GACAAAAAGA TCCTCGACCT CGCTTGTCTG AGGCATTTAG GCTTTCCACT ACCGAACCCG 
CTCATCGAAG TGAGCCAGGT TTATCACGAT AAGCTCGAAC GTCATTTACC TAACGCCTAC 
TTCGACTTAA GTCTTGATGC GATTTGTAAG CACCTTGAAC TGCCGATTCA AGACAAACAC 
GATGCCCTGC AGGACGCAAA ATCCGCCGCT TTAGTGTATG TGCGTCTCAC CAAAGGCGAT 
TTACCAAACC TGAGCGTGCC TTATACCCAA TAG
 
Protein sequence
MNWLQRKYWH YKLKGSPYQP LFCSPQKGEF VSLDCETTSL DPNRAELVTI AATKIIDNRI 
ITSKPFEVRL RAPQSLDSGS VKIHHIRHQD LVDGISEKEA LIKLLDFIGN RPLVGYHIRY 
DKKILDLACL RHLGFPLPNP LIEVSQVYHD KLERHLPNAY FDLSLDAICK HLELPIQDKH 
DALQDAKSAA LVYVRLTKGD LPNLSVPYTQ