| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004501 |
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| Symbol | |
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| ID | 8558269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 3226408 |
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| End bp | 3228075 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407630 |
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| Product | LppC putative lipoprotein |
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| Protein accession | YP_003287124 |
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| Protein GI | 262395270 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000349106 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAAG CTGATAGCAC GGAAGGCAGT TTACGAAATG ACTGGTTGAT CATGGCAACC
AAAGCCGCTA TTCAAGCGAA CCAGTTTGAT CAAGCAGAAC TGTTGATCAA ACGTCTGGCT
CGACAACAGT TGACCGAAGT TCAGCAAGCG GAGTGGCAAC TGGCGCGTGC GACCATACAG
CAAAAGCAAG GTAATTACTC GCAGTTGCTG CAATTGTTAA ACTTTAAACC TTGGTGGAAA
TTGCCAAACG AGCAATGGAA AGACTATTAC TTGATGCGTG CCGACGCTTA TCAAGGCCTT
AACCAAGCGT TTGAAGCAAA CCGCCAGCTG GTTGCATTTG GTCAATACGC CTCGTCAGCA
GAGCAGAGGG AAATCTCTAG CCGTATTTGG ATGAACTTTG GCAGCTACTC AGAATATGAA
CTCACCTCAT TAGAAACAGA GCCGAATGAG GATGTTCTAG ACGGCTGGCT TCAGCTAGCT
GTTTATGCAA AAACGCTATC GGGCAACCTG TCCCAACTTA AAAATACGCT AGAGCGCTGG
TTAAGCGAAA ACCCTTCGCA CCCTGCTGCT ATCTATACAC CAGAAGAGAT TCAAAACATT
CTCTCTCTTG ATATCGTGAA GCCAAACAAT ACTGCTTTAT TGCTGCCGCT GACGGGTAAG
TTCTCGCCAC AAGCGCAATT AATTCGTGAT GGTTTTGTGT TTGCGATGAT GAATGATCGT
AATCGAGATC CTAGTGCAAC ACTTACGGTG ATTGACACCA ATGCGTATAA CGCTGACCAA
ATTAAACAAC GCTTGATCAA TAAAAACATC GATTTTGTTG TTGGCCCTCT AGAAAAAGAG
AACGTGGAGT TGTTGCACAC AACCATGGAT GGCTCAGCAA ATGGCCCTAC CATTCCAGCC
CTTGCGCTAA ATATCCCCGA GGATGTGCAA CCAGATAGCA ATATTTGCTA CTTGGCATTA
TCACCGGAAC AAGAAGCCGC ACAAGCTGCA AAACACTTGT TCAGCGAAGG CTACAACTTC
CCTCTTATTC TTGCACCAAA AGGCAGCTTT GGAGAGCGTG TAACTGAGGC TTTCAACAAA
GAATGGCGAA AGTACAGCTC TAACAAAGTC GCAGCAAGTT ACTTTGGTGA CAAGCGCCAA
CTTCAAAAAG ACATCAATGA AGTATTTGGC CTGCAAGAGA GCAAGCAGCG TATCGCCCAG
ATGCAATCAT TAATGCGAAT TAAGCTTGAA ACACAGCCAC GTAGCCGTCG TGATGTTGAT
GCGGTTTATA TCGTAGCTAG AAGCACTGAG CTGACTTTGA TCAAGCCGTT TATCGAAGTA
GCGATTAACC CTGATGCGAA AGCACCACAA ATCTTCTCTA GTTCGCGTAG CAACAGTGGC
GGCGCGACAT ACGAAGATCT AACAGGCATC ATCTACAGCG ACATTCCATT GCTGATTGAC
CCAGATCCTA GCGTGACCGC TGAAATGAAC GAGCTTTGGT CAGAGCAATC TAACATGGAA
AAACGTTTGA AAGCACTCGG TATGGATGCA TATAAATTGA TCGGTGAACT TCCACAAATG
AAGGTCGTTC CTGGTTACTC AGTCGGTGGC CAAACCGGTA TTTTAAGTAT CGACAACAAC
TGTGTTGTAC AGCGTGAATT GAGCTGGGCT GAGCGTGGGG CTCTTTAG
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| Protein sequence | MIQADSTEGS LRNDWLIMAT KAAIQANQFD QAELLIKRLA RQQLTEVQQA EWQLARATIQ
QKQGNYSQLL QLLNFKPWWK LPNEQWKDYY LMRADAYQGL NQAFEANRQL VAFGQYASSA
EQREISSRIW MNFGSYSEYE LTSLETEPNE DVLDGWLQLA VYAKTLSGNL SQLKNTLERW
LSENPSHPAA IYTPEEIQNI LSLDIVKPNN TALLLPLTGK FSPQAQLIRD GFVFAMMNDR
NRDPSATLTV IDTNAYNADQ IKQRLINKNI DFVVGPLEKE NVELLHTTMD GSANGPTIPA
LALNIPEDVQ PDSNICYLAL SPEQEAAQAA KHLFSEGYNF PLILAPKGSF GERVTEAFNK
EWRKYSSNKV AASYFGDKRQ LQKDINEVFG LQESKQRIAQ MQSLMRIKLE TQPRSRRDVD
AVYIVARSTE LTLIKPFIEV AINPDAKAPQ IFSSSRSNSG GATYEDLTGI IYSDIPLLID
PDPSVTAEMN ELWSEQSNME KRLKALGMDA YKLIGELPQM KVVPGYSVGG QTGILSIDNN
CVVQRELSWA ERGAL
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