| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004468 |
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| Symbol | |
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| ID | 8558236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 3184761 |
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| End bp | 3189224 |
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| Gene Length | 4464 bp |
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| Protein Length | 1487 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407597 |
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| Product | glutamate synthase [NADPH] large chain |
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| Protein accession | YP_003287091 |
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| Protein GI | 262395237 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTTT ATGATCCAAG TCTTGAGAAA GACAACTGTG GATTTGGCTT GATCGCGCAT
ATGGAAGGCG AACAAAGCCA CAAGCTGGTT CGTACAGCAA TTTCTGCACT TGACCGAATG
ACCCACCGTG GTGGTATTGC CGCCGATGGT AAAACCGGTG ATGGTTGTGG TCTTCTATTA
CAAAAGCCCG ATTCCTATTT ACGTCTTATT GCCGAAGAAA ATGGTTTCAA CCTTGGCAAG
CAATACGCCG TAGGGATGAT TTTCTTCAAC CAAGATCCGG TCAAAGCTCA ACTCGCTAAA
GACATCGTCA ACAGAGAACT TGCGCAAGAG ACGCTAACAG TGGCCGGTTG GCGTGAAGTT
CCAACCAATT CAGAAGTGCT CGGTCCAATT GCGGCTAACT CGCTTCCAAA TATTCAGCAA
GTCTTTATCT CTGCACCGGC TGGTTGGCGA GAGCGTGACA TTGAACGCCG TCTCTACATC
GCACGCCGTC GCATCGAGAA ACAAATCACC GAAGATCCTG ATTTCTACAT CTGTAGCTTG
TCGACTCAAG TTTTGGTGTA CAAAGGCCTG TGCATGCCTG CGGACTTGCC TCGCTTCTAC
CTAGATCTTG CTGATCTACG CATGGAATCC GCTATCTGTC TGTTCCACCA GCGTTTTTCT
ACCAATACTC AACCGCGTTG GCCATTGGCT CAGCCGTTCC GCTATCTTGC TCATAACGGT
GAGATCAACA CCATTGAAGG TAACCGCCAA TGGGCGCGCG CGCGCGCTTA CAAGTTCTCG
TCACCACTGC TGCCCGATCT TCAAACTGCA GCACCATTTG TGAACGAGAC AGGTTCAGAC
TCCTCTAGCT TGGATAATAT GCTGGATCTC TTCTTAGCTG GTGGCATGGA TATCTTCCGC
GCCATGCGTA TGCTTGTGCC GCCTGCATGG CAAAACCATC CAGATATGGA TCCGGATCTG
CGGGCGTTTT ACGATTTCAA CTCCAAGCAC ATGGAACCAT GGGATGGCCC AGCAGGTATC
GTACTGTCCG ATGGTCGTTA TGCTGCTTGT AATCTAGACC GAAATGGTCT GCGTCCTGCA
CGTTATGTAA TTACCAAAGA CAAGTTGATC ACTCTGGCAT CTGAGGTAGG GATTTGGAAT
TACGCCCCAG ATGAAGTTGC CGAAAAAGGG CGTGTAGGTC CGGGTGAATT GCTCGTCATC
GACACTCGTA AAGGTAAGCT TTGGCAGTCT AGCGAGATCG ATAATGATCT GAAATCTCGT
CACCCTTATC GCGAATGGAT GGAAAACAAC GTTCGCAAAC TCACACCATT TTCTCAGCTA
CCTGAGGATC AAGTAGGCGA GCGCAGCTTT GATGAAGACT TACTTAAGAC TTATCAAAAG
CAATTCGCGA TGACGAACGA AGAAGTCGAC CAAGTTCTGC GTGTACTCGG AGAAATGGGC
CAAGAAGCCG TTGGTTCTAT GGGTGACGAT ACTCCAATGG CAGTGCTCTC CTCAAAAGAG
CGCTTGGTAA CTGACTACTT CCGCCAGAAG TTCGCTCAGG TCACCAATCC ACCGATCGAT
CCACTGCGTG AAAAACACGT GATGTCACTG GCAACCAGTA TCGGTAAGGA AATGAATGTC
TTCTGTGAAA CCGATGGCCA CGCGCATCGC GTAACATTTG ATTCGCCTGT ACTGCTTTAT
TCAGACATGC AGCAACTGCT CGAGCTTGGT GACGATCACT ACCGTAATAC CATTCTAGAT
ATCAACTACG ACCCACAAGA GAAAGATCTT AAACAAGCCA TTAATGATCT CTGTGAGCAA
GCAGAGCAAG TCGTACGTGA AGGCACGGTT TTAGTGGTAC TTTCAGATCG CGCTTTGGTC
AAAGGCAAGT TACCAATTCC AGCGGCAATG GCAGTCGGCG CCGTTCAAAC TCGTTTGATT
GATGCGAACT TACGTTGCGA TGCCAACATT GTAGTCGAAA CCGCAACTGC ACGTGACCCA
CACCAATTTG CTGTCTTGCT TGGCTTTGGC GCCACTGCAA TTTACCCATA CCTTGCTTAT
GAAGCACTAG GCAAACTGAT TGATGATAAA GCGCTAGAAA AAGACTATCG CGATGTGATG
CAAAATTACC AATACGGCAT CAACAAAGGC CTGTACAAGA TCATGTCGAA AATGGGGATC
TCAACCATCG CCTCTTACCG CTGCTCACAA CTGTTTGAAG CAGTTGGCTT GAGCCAAGAT
GTGGTCGATC TGTGTTTTAA AGGCGTCACA ACTCGTATTG AAGGCGCAAA TTTTGACGAC
TTCCAGCAAG ATCTTACAAA CTTATCTCGC AAAGCATGGG CGAAACGTAA ATCGATTGAT
CATGGCGGCT TGTTAAAGTA TGTCCATGGA GGTGAGTATC ATGCTTACAA CCCGGATGTT
GTCGGCACGC TGCAACAGGC CGTTAAATCT GGCGAAAGTA ACGACTATCA GAGCTTTGCT
AAGCAGGTAA ACCAACGCCC TGTTGCCATG CTGCGTGACT TAATGTCGCT GAAAAAATCA
GACTCACCGC TGCCACTAGA GCAAATAGAA CCACGCACTG AACTGTTCAA ACGCTTCGAC
TCTGCGGCCA TGTCCATTGG CGCACTTAGC CCTGAAGCGC ATGAAGCACT CGCGACTGCG
ATGAACCGTC TTGGTGGCTA TTCAAACTCC GGTGAAGGTG GTGAAGATCC TCGCCGTTTC
GGCACTGAAC GTAACTCGCG CATCAAGCAA ATTGCTTCAG GCCGATTTGG TGTCACGCCT
CATTACCTTA CTAATGCGGA TGTACTACAA ATCAAGGTAG CGCAAGGAGC TAAACCGGGT
GAAGGTGGTC AGCTACCGGG ACACAAAGTC ACCGCAGAAA TCGCCAAGCT ACGTTACTCC
GTGCAAGGGG TGACGTTAAT CTCTCCTCCT CCACACCACG ATATTTATTC TATTGAAGAT
TTGGCCCAGC TGATCTTCGA CCTTAAACAA GTCAACCCGA ATGCGCTGGT TTCGGTAAAA
CTCGTCTCCG AGCCAGGTGT CGGCACCATC GCAACGGGCG TAGCAAAGGC TTACGCTGAT
CTTATTACCA TCTCGGGTTA CGACGGTGGT ACTGCAGCAA GCCCATTAAC TTCGGTAAAA
TACGCAGGTA GTCCATGGGA ATTAGGTCTA GCAGAGACGC AACAAGCACT GGTTGCTAAT
GGTCTGCGTC ATAAGATCCG CCTACAGGTA GACGGTGGTC TAAAGACTGG TCTAGACGTG
GTTAAGGCCG CGATTCTTGG TGCGGAAAGC TTCGGATTTG GTACCGCGCC AATGGTTGCT
ATGGGTTGTA AGTTCCTGCG AATTTGTCAC CTCAATAACT GTGCAACAGG GGTTGCGACT
CAAGACGAAA CGCTGCGTAA AGAGTACTTC AAAGGCTTAC CTGAAATGGT GATGAACTAC
TTCACCGGAC TGGCAGAAGA AGTGCGCGAG CTGCTTTCTG AGCTAGGAGT TGAAAAACTG
ACGGACTTGA TTGGTCGTAC CGATTTACTT GAAGCAGTAG AAGGCTTTAC CGCGAAGCAA
ACCAAATTGG ATCTATCCAA CATTCTAGAA GCTCCCGTCT CGCCTGAAGG TCATCCGCTG
TTTTGGACAG AGCCAAACAA ACCGTTTGAT AAAGCTGAGC TCAATCAAAA GATCATTGAT
GATGCCATGC ATGCGGTAGA AAACAGCCAA TCAGCAAGTT TCTTCTACAA TGTCATCAAC
ACTGATCGTT CTGTGGGTGC TCGCTTATCT GGCGAAATAG CGAAGCGCTA TGGCAACCAA
GGATTGGCGG CTTCCCCTAT CAAAATCTAT CTTGACGGCA CTGCCGGCCA GTCGTTTGGC
GTTTGGAATG CGGGTGGCGT AGAGCTTTAC CTCACAGGTG ATGCGAATGA CTACGTAGGG
AAAGGCATGG CAGGCGGCAA GATCGCCATT AAACCTCACT TAGGTACAGC GTTCAAGTGT
CATGAAGCCA CCATTATTGG TAACACGTGT TTGTACGGCG CAACGGGCGG TAAACTGTTC
GCGGCAGGTA AAGCGGGTGA GCGTTTTGGG GTACGTAACT CAGGTACGAT TGCCGTCATT
GAAGGTGCGG GAGATAACGC TTGTGAGTAC ATGACAGGCG GTATTGTTGC CATTCTAGGT
GCAACAGGCG TGAACTTTGG TGCAGGTATG ACCGGAGGCT TTGCCTATGT TCTGGATGAA
AACCAAAGCT TTGAAGGTCG AGTCAATACT GAATCTGTCG AAGCCATTTC ATTGTCCGAT
CTATACATCC ACCAAGAGCA TTTGCGCGGC CTGATTGCGG AACACCTTGA AGAAACAGGG
TCGAGCCACG CAGAAAATAT TTTGGCGAAC TTTGATGAAT GGATTCCAAA GTTCTATTTG
GTGAAACCAC AAGCGGCAGA TCTTCGCACG CTACTTGGTC ACCAGAGCCG CAGTGCCGCT
GAGCTGCGCG TTCAAGCCCA GTAA
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| Protein sequence | MALYDPSLEK DNCGFGLIAH MEGEQSHKLV RTAISALDRM THRGGIAADG KTGDGCGLLL
QKPDSYLRLI AEENGFNLGK QYAVGMIFFN QDPVKAQLAK DIVNRELAQE TLTVAGWREV
PTNSEVLGPI AANSLPNIQQ VFISAPAGWR ERDIERRLYI ARRRIEKQIT EDPDFYICSL
STQVLVYKGL CMPADLPRFY LDLADLRMES AICLFHQRFS TNTQPRWPLA QPFRYLAHNG
EINTIEGNRQ WARARAYKFS SPLLPDLQTA APFVNETGSD SSSLDNMLDL FLAGGMDIFR
AMRMLVPPAW QNHPDMDPDL RAFYDFNSKH MEPWDGPAGI VLSDGRYAAC NLDRNGLRPA
RYVITKDKLI TLASEVGIWN YAPDEVAEKG RVGPGELLVI DTRKGKLWQS SEIDNDLKSR
HPYREWMENN VRKLTPFSQL PEDQVGERSF DEDLLKTYQK QFAMTNEEVD QVLRVLGEMG
QEAVGSMGDD TPMAVLSSKE RLVTDYFRQK FAQVTNPPID PLREKHVMSL ATSIGKEMNV
FCETDGHAHR VTFDSPVLLY SDMQQLLELG DDHYRNTILD INYDPQEKDL KQAINDLCEQ
AEQVVREGTV LVVLSDRALV KGKLPIPAAM AVGAVQTRLI DANLRCDANI VVETATARDP
HQFAVLLGFG ATAIYPYLAY EALGKLIDDK ALEKDYRDVM QNYQYGINKG LYKIMSKMGI
STIASYRCSQ LFEAVGLSQD VVDLCFKGVT TRIEGANFDD FQQDLTNLSR KAWAKRKSID
HGGLLKYVHG GEYHAYNPDV VGTLQQAVKS GESNDYQSFA KQVNQRPVAM LRDLMSLKKS
DSPLPLEQIE PRTELFKRFD SAAMSIGALS PEAHEALATA MNRLGGYSNS GEGGEDPRRF
GTERNSRIKQ IASGRFGVTP HYLTNADVLQ IKVAQGAKPG EGGQLPGHKV TAEIAKLRYS
VQGVTLISPP PHHDIYSIED LAQLIFDLKQ VNPNALVSVK LVSEPGVGTI ATGVAKAYAD
LITISGYDGG TAASPLTSVK YAGSPWELGL AETQQALVAN GLRHKIRLQV DGGLKTGLDV
VKAAILGAES FGFGTAPMVA MGCKFLRICH LNNCATGVAT QDETLRKEYF KGLPEMVMNY
FTGLAEEVRE LLSELGVEKL TDLIGRTDLL EAVEGFTAKQ TKLDLSNILE APVSPEGHPL
FWTEPNKPFD KAELNQKIID DAMHAVENSQ SASFFYNVIN TDRSVGARLS GEIAKRYGNQ
GLAASPIKIY LDGTAGQSFG VWNAGGVELY LTGDANDYVG KGMAGGKIAI KPHLGTAFKC
HEATIIGNTC LYGATGGKLF AAGKAGERFG VRNSGTIAVI EGAGDNACEY MTGGIVAILG
ATGVNFGAGM TGGFAYVLDE NQSFEGRVNT ESVEAISLSD LYIHQEHLRG LIAEHLEETG
SSHAENILAN FDEWIPKFYL VKPQAADLRT LLGHQSRSAA ELRVQAQ
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