| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004436 |
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| Symbol | |
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| ID | 8558204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3143983 |
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| End bp | 3145317 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407565 |
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| Product | transcriptional regulator VpsR |
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| Protein accession | YP_003287059 |
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| Protein GI | 262395205 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGGC AGTTTAAGAT GGATTCCATC CCGGGATCGC TTGTGGTAGT TGGCGGTACT
TATGAGCCTT GGTTATCAGT ACTTGAGCAA GTGGGCTGGA AGTGTCACCA AGTGGGTGAC
TTACGCAAAG CTAATACGTT GTTAGAGGAT ATTGGTCCAT GTATCGGTAT TGTCGATCTC
AGCCATGACG AATTCAGCTT GAACGGTTTG GCGAACTTAG TCAGTTCTCA CAAACACGTG
CGTTGGTTAG CGTTTATTCG TGAATCTCAG CTTGGCACTG ATACTATATG CCAGTTCATT
GTTAACTTTT GTATCGACTT TTTCACTGCG CCAATCCCGG ATGCCCAGCT TTTAAGCACG
ATTGGTCACC AGCTTGGTAT GCTCAAGTTG GAGAAAAAAG TTTGGCCTAG TTTTGGTAGC
AGCTTAGACA TGGGGCTGAT CGGTGAATCT ATCCCGATGA AGCGTTTACG CGATCAAGTA
AAGAGAATCG GTCCGACGGA CGTCAGTATT CTGATTTCTG GGGAAAGTGG TACAGGTAAA
GAGGCGGTTG CTCGCGCTAT CCACAAAGTC TCTTCACGCT CTCATAAACC GTTTATGGCA
ATTAACTGTC GCGCACTCAA TGAGCAACGT TTCCAGGCGG AAGTGTTTGG TATCAATGCC
GATGAAGATA TGGAAGCATG CATGCTCGAA CAAGCGGATG GCGGTACGGT GCTGTTTAAT
GACATTCTTA CTATCTCAAA AGAGCAGCAA ATGAATCTGC TGAGATTCTT GCAAGAAGGC
ACCATTGATA CCAAAGATGG TGTAAAAGCG GTCAATGTGC GCATCCTTGC TGCTAACTCG
TCAGATGTAG AAAAAGCCTT GATTGACGGA GATTTTAATG AAGAGCTTTA TCACTACATT
AACGTATTAC GCATTAATGT CCCGAGCTTA AAAGAGCGCG CGAGCGATAT TTCTTTGTTA
GCGCGCTACT ACTTACAAGA GTTTTCTAAA GAGTATAACT CGCAAGCAAA AAGCTTTTCT
GAGGATGCAC TCAAGGCACT GACACGTTAT TTCTGGCCAG GTAACGTACG TGAGTTGATG
AACCAAGTGA AACGAGCGGT TCTGATGTCT GACAGCGTAA TGATTGAAGA GCATCACTTA
GATTTACCTC AACGTAATGA CTCAAAGCGC AGCTTGAAAT CAATCCGAGA GAAGAGTGAA
CGTGATGCGT TGCTGGTTGT TTTGGAATCT CATTCTGGTC AAGTTTCAAA TGCGGCGAAA
GAGCTCGGAG TTTCGCGTGC AACCATGTAT CGACTACTTA ATAAACATAA CTTGATTTCC
GAACAAGCCA TGTAG
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| Protein sequence | MAGQFKMDSI PGSLVVVGGT YEPWLSVLEQ VGWKCHQVGD LRKANTLLED IGPCIGIVDL
SHDEFSLNGL ANLVSSHKHV RWLAFIRESQ LGTDTICQFI VNFCIDFFTA PIPDAQLLST
IGHQLGMLKL EKKVWPSFGS SLDMGLIGES IPMKRLRDQV KRIGPTDVSI LISGESGTGK
EAVARAIHKV SSRSHKPFMA INCRALNEQR FQAEVFGINA DEDMEACMLE QADGGTVLFN
DILTISKEQQ MNLLRFLQEG TIDTKDGVKA VNVRILAANS SDVEKALIDG DFNEELYHYI
NVLRINVPSL KERASDISLL ARYYLQEFSK EYNSQAKSFS EDALKALTRY FWPGNVRELM
NQVKRAVLMS DSVMIEEHHL DLPQRNDSKR SLKSIREKSE RDALLVVLES HSGQVSNAAK
ELGVSRATMY RLLNKHNLIS EQAM
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