Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004373 |
Symbol | |
ID | 8558134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 3068047 |
End bp | 3068748 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407495 |
Product | transcriptional regulator LysR family |
Protein accession | YP_003286996 |
Protein GI | 262395142 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGTAA AGCAGGGGCG AGAGCTGTTA GCAAAAGGGC AAGATTTGGT CGAGCTTGGA CGTATGTGCC AAGGCGACGA TATGCAAGGC CAGCTAAAAG TGGGATGCAT ACCAACAATT GCTCCGTTTT TACTGTGTGA TTTGGTGCAA GAGGTTAACT ACCGTTTCCC ACAACTGAAT CTTTTATTAA GAGAAGACAC GACAACAAAC TTACTTCAAG CGCTTAGACA CGGTGAGCTG GATGTACTCA TTTTAGCGTT GCCAGTCGAA ATTGACGGTA TGGAAAGCCG AGTGGTGGGT AAGGATCCGT TTCGAATGGT TATTAGTGCG AATCAAGCCC AATCGGTGCC TGTGCCGATT CGTTACGCAG ATTTACCTGA CGAATCCGTC TTTTTATTAG AGAAAGAGCA TTGCTTAACG GAACACGCGG TATCTGCGTG TAAATTAACA GATAAAGAAA AAATTAATCC GTTTACAGCA ACCAGCCTTC ATACTTTGGT GCAAATGGTT GCGAATGGTT TGGGAACAAC GTTCATTCCT CAAATGGCTA TCGACCACGG CCTACTGCAT AACCAGAATT TAGTCGTGAT CGATCCCCCA GGAAAGCAAG CCTATCGCGA AATTGGCTTA GTTTGGCGTC CGAGTTCATC AAGAACGAAA ACATTTAATC AGCTTGCAGA AGTCGTTTCC GAACTGCTTT AG
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Protein sequence | MVVKQGRELL AKGQDLVELG RMCQGDDMQG QLKVGCIPTI APFLLCDLVQ EVNYRFPQLN LLLREDTTTN LLQALRHGEL DVLILALPVE IDGMESRVVG KDPFRMVISA NQAQSVPVPI RYADLPDESV FLLEKEHCLT EHAVSACKLT DKEKINPFTA TSLHTLVQMV ANGLGTTFIP QMAIDHGLLH NQNLVVIDPP GKQAYREIGL VWRPSSSRTK TFNQLAEVVS ELL
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