| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004247 |
|---|
| Symbol | |
|---|
| ID | 8558008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2926454 |
|---|
| End bp | 2927830 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646407369 |
|---|
| Product | decarboxylase family protein |
|---|
| Protein accession | YP_003286870 |
|---|
| Protein GI | 262395016 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.124703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACCC ATATAAGCCC CGCTGGTAGC ATGGACTTGC TATCTCAATT AGAAGTAGAG
CGCTTAAAAA ACACGGCCTC GAGTGAACTT TATCAACTGT ACCGCAACTG CACGTTAGCG
GTGTTGAACT CCGGCAGTCA TACCGATAAC TCGAAAGAGC TGCTCGATAA ACACCAGTCG
TTTGATGTCA ACGTAGTGCG CCGCGAGCGT GGTATTAAGC TTGAGCTGAC TAACCCACCT
GAGCACGCCT TTGTCGATGG CGAGATAATT AAAGGTATTC AAGAGCATCT GTTCTCCGTG
TTACGCGATA TTGTTTATGT CAATATGCAT TTAGCAGACG CACAACGACT CAACCTGACG
AACCCAATTC ACATCACTAA CCTCGTGTTC GGTATTCTGC GTAATGCCAG AGCACTCACA
CCAGGTATCG AGCCAAACCT CGTCGTGTGT TGGGGTGGTC ACTCTATCAA TGGCGTGGAA
TATCAATACA CACGTGAAGT CGGTAACGAG CTTGGCTTGC GTGAACTTAA TATCTGCACG
GGTTGTGGCC CTGGTGCGAT GGAAGGGCCA ATGAAAGGTG CCGCTATCGG ACATGCGAAG
CAGCGTTATA CTCAACAACG TTATCTTGGT TTAACCGAGC CTTCGATTAT TGCAGCCGAG
CCACCAAACC CAATCGTGAA TGAGCTGGTT ATCATGCCAG ACATCGAAAA GCGTTTGGAA
GCCTTTGTAC GTATGGCGCA TGGCATTGTG ATTTTCCCTG GTGGTCCGGG CACTGCAGAA
GAGTTGCTGT ATATTCTTGG CATTATGATG CACCCAGACA ACGCCGATCA GCCAATGCCT
ATCGTGTTAA CAGGACCAAA AGAGAGTGAA GAGTACTTCC GCTCTATCGA CGAGTTTGTT
CGCGATACAC TTGGCGAAGA AGGTCAAAAG CATTACGAGA TCGTCATTGA CGATCCGGCA
GAAGTGGCAC GTATCATGAA GCGCTCCATG GACTCTGTAC GCCTTCACCG AAAAGAAAAA
GGCGATGCTT ATAGCTTTAA CTGGTCATTA AAAATCGAGC CTAACTTCCA GTTACCATTC
GATCCAACTC ATGAGTCGAT GGAGCAATTG GATTTAAGCT TAGATCAAGA ACCTCAAGTC
TTAGCGGCCA ACCTGCGTCA AGCCTTCTCC GGTATCGTGG CTGGTAACGT GAAAGCCGAA
GGAATTCGAG AAATCGAACG TCGAGGCCCT TTCACCATTC ACGGTGATCC TGTGCTAATG
AAAAAGCTCG ATAAGTTACT ACAAGACTTT GTCGAACAAC ACCGAATGAA ATTACCTAGC
GGTTCAGACT ACGAACCGTG TTATCGCATC GCTCACCCAG AAATTGGTGG TCGATAG
|
|---|
| Protein sequence | MITHISPAGS MDLLSQLEVE RLKNTASSEL YQLYRNCTLA VLNSGSHTDN SKELLDKHQS
FDVNVVRRER GIKLELTNPP EHAFVDGEII KGIQEHLFSV LRDIVYVNMH LADAQRLNLT
NPIHITNLVF GILRNARALT PGIEPNLVVC WGGHSINGVE YQYTREVGNE LGLRELNICT
GCGPGAMEGP MKGAAIGHAK QRYTQQRYLG LTEPSIIAAE PPNPIVNELV IMPDIEKRLE
AFVRMAHGIV IFPGGPGTAE ELLYILGIMM HPDNADQPMP IVLTGPKESE EYFRSIDEFV
RDTLGEEGQK HYEIVIDDPA EVARIMKRSM DSVRLHRKEK GDAYSFNWSL KIEPNFQLPF
DPTHESMEQL DLSLDQEPQV LAANLRQAFS GIVAGNVKAE GIREIERRGP FTIHGDPVLM
KKLDKLLQDF VEQHRMKLPS GSDYEPCYRI AHPEIGGR
|
|---|
| |