| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004112 |
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| Symbol | |
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| ID | 8557852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2777181 |
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| End bp | 2780006 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407214 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_003286737 |
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| Protein GI | 262394883 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACG GCGTGATGAA GGCATGGCTC GAGTCTTCAC ACTTGGCTGG CGCCAATGCA
ACGTATGTAG AGGACCTCTA CGAACTGTAT CTAAGTGATC CCGATCTGGT AAGTGAGGAG
TGGAAACGTG TTTTTGAAGG CTTACCTAAG CCGTCAGAAG AAGTGGCAGA ACAACCACAT
TCACGTGTCC GTGACTACTT CCGTCGACTC GCTAGAGAAA CAAAGCATTA CAATGTCCAA
GTTAGTGACC CAGATGTCGA TGCAAAACAA GTAAAAGTTC TACAGCTAAT CAACGCATAC
CGTTTCCGCG GACATGAAGC TGCAGAATTA GACCCACTAG GTCTATGGCA ACGCCCAACC
GTGGCGGAGT TAGACCCTGC TTTTCATAAT CTTACCGAAG ATGACTTCGA AGAAACTTTC
AACGTAGGTT CTTTTGCTGT TGGGCAAGAA ACCATGAAGT TGAAAGACAT CTATGAAGCC
CTCAACAAAA CTTACTGCGG TTCCATCGGT GCTGAATACA TGCACATGAC TGACACAGAG
CAAAAACGTT GGATCCAACA ACGTCTTGAG TCTGTCGTAG GCCAGCCATC ATTCAACAAA
GATGAGAAGC GCACATTCCT AGAAGAGCTA ACAGCCGCTG AAGGTTTGGA GCGTTACCTC
GGAGCGAAAT TCCCAGGTGC AAAACGTTTC TCTCTAGAAG GTGGTGACGC ACTGATTCCG
ATGACGAAAG AGTTGATCCG TCACGCGGGA ACAAGTGGGA TGCGTGAAGT GGTTATCGGT
ATGGCTCACC GTGGTCGTTT GAACATGCTG GTGAACGTGC TTGGTAAGAA GCCTCAAGAT
CTATTCGATG AGTTTGCCGG TAAACACGAC GAAACTTGGG GCACCGGTGA TGTGAAATAT
CACCAAGGTT TCTCTGCCGA CTTTGCCACC CCAGGTGGTG ATGTTCACTT AGCTCTTGCA
TTTAACCCAT CGCATCTAGA AATCGTCAAC CCAGTAGTCA TGGGGTCGGT GCGAGCACGT
CAAGATCGCT TGGGTGATAA TCAAGGTAGC AAAGTGCTTC CTATCACTAT CCACGGTGAC
TCTGCAATCG CTGGTCAGGG TGTGGTTGCC GAAACGTTCA ACATGTCACT GGCTCGTGGT
TTCCAAGTCG GTGGTACGGT GCGTATCGTT ATTAACAACC AAGTTGGTTT TACGACGTCT
AACCCTCGTG ACACGCGTTC AACGATGTAC TGTACAGATA TCGCGAAGAT GGTTCAGGCG
CCAATCTTCC ATGTGAATGC CGATGACCCA GAAGCGGTTG CTTTTGTTAC TCGTATTGCT
TTGGATTACC GCAACGAGTT CAAGCGCGAT GTCGTGATTG ATTTGGTGTG TTACCGTCGC
CATGGTCACA ACGAGGCCGA TGAGCCAAAC GCGACTCAGC CTTTGATGTA CCAAAAAATC
AAAAAACACC CTACACCACG CAAATTGTAT GCGGATATTC TGATCGATAA AAACGAATCA
GATATCGAGA CAGCGACTCA GTTAGTCAAT GAGTATCGCG ATGCATTAGA TCGCGGTGAA
GTGGTGGTTA AAGAATGGCG TCCAATGGCG TTGCACTCTG TAGACTGGTC CCCTTACTTA
GGGCACGAAT GGGATATGGA GTGGGATTCA AAATACGACA AGACACGCCT TATTGAGCTA
GGTAATCGTC TGTGTCAGTA CCCAGAAAGC CATAAACTGC AAAGCCGTGT TAATAAGCTT
TATAACGATC GCCTAGCAAT GATGACCGGT GAAAAAGCAA TCGACTGGGG TATGGCAGAA
ACTCTCGCGT ATGCAACATT AGTTGATGAT GGTAAGCGTA TTCGCCTTTC TGGTCAGGAT
TCGGGTCGTG GTACTTTCTT CCACCGTCAC TCGGTTCTTC ATAACCAAAC AGATGCAAGT
ACGTACATTC CATTAGCGAA TATTCATGAC AATCAGGGTC CATTCCAAGT GTTTGACTCA
GTACTGTCAG AAGAAGCGGT ACTGGCATTT GAATACGGTT ACGCAACAGC AGAGCCAGGT
GGTTTGACTA TTTGGGAAGC GCAGTTTGGT GACTTTGCCA ACGGCGCGCA GGTTGTGATT
GACCAATTCA TCTCGTCAGG TGAGCAGAAA TGGGCACGCT TGTGTGGTCT CACAATGCTT
CTACCTCACG GTTACGAAGG TCAAGGCCCA GAGCACTCCT CTGCACGTCT AGAGCGTTAC
CTTCAGTTGT GTGCTGAGCA AAATATGCAG GTTGTAGTTC CTTCAACACC GGCTCAGGTA
TACCACATGA TTCGTCGTCA AGTTGTACGC CCAATGCGTC GACCTCTGAT TGTGATGTCG
CCAAAATCTT TGCTGCGCCA TCCTCTATGT ACTTCGACAA TTGAAGACTT AGCGGACGGT
ACATTCCAAT CTGCAATTCC AGAAGTAGAT GATTTAGACC CAAGCAAAGT AAAACGCGTC
GTGTTCTGTT CAGGTAAGGT TTATTTTGAC CTACTGGAGC AGCGCCGTAA CAACGAGCAA
GACGATGTTG CTATCGTGCG TATCGAGCAG CTTTATCCAT TCCCGATGGA AGAAGTACAA
ACAGCGATTG CTCAATACAC TAACGTTGAA GACTTCGTGT GGTGTCAGGA AGAGCCTCAG
AACCAAGGTG CTTGGTACTG TAGCCAACAC AACTTCCGTG CCGCTATTCC TGCAGGTGCA
GATCTTAAAT ACGCAGGTCG CCCAGCTTCT GCTTCGCCAG CAGTTGGCTA CATGTCGGTG
CACTTGAAAC AACAAAAAGC GTTGGTTGAA GACGCTCTGA ACGTGAACTC AAAAACTTCG
AATTAA
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| Protein sequence | MHNGVMKAWL ESSHLAGANA TYVEDLYELY LSDPDLVSEE WKRVFEGLPK PSEEVAEQPH
SRVRDYFRRL ARETKHYNVQ VSDPDVDAKQ VKVLQLINAY RFRGHEAAEL DPLGLWQRPT
VAELDPAFHN LTEDDFEETF NVGSFAVGQE TMKLKDIYEA LNKTYCGSIG AEYMHMTDTE
QKRWIQQRLE SVVGQPSFNK DEKRTFLEEL TAAEGLERYL GAKFPGAKRF SLEGGDALIP
MTKELIRHAG TSGMREVVIG MAHRGRLNML VNVLGKKPQD LFDEFAGKHD ETWGTGDVKY
HQGFSADFAT PGGDVHLALA FNPSHLEIVN PVVMGSVRAR QDRLGDNQGS KVLPITIHGD
SAIAGQGVVA ETFNMSLARG FQVGGTVRIV INNQVGFTTS NPRDTRSTMY CTDIAKMVQA
PIFHVNADDP EAVAFVTRIA LDYRNEFKRD VVIDLVCYRR HGHNEADEPN ATQPLMYQKI
KKHPTPRKLY ADILIDKNES DIETATQLVN EYRDALDRGE VVVKEWRPMA LHSVDWSPYL
GHEWDMEWDS KYDKTRLIEL GNRLCQYPES HKLQSRVNKL YNDRLAMMTG EKAIDWGMAE
TLAYATLVDD GKRIRLSGQD SGRGTFFHRH SVLHNQTDAS TYIPLANIHD NQGPFQVFDS
VLSEEAVLAF EYGYATAEPG GLTIWEAQFG DFANGAQVVI DQFISSGEQK WARLCGLTML
LPHGYEGQGP EHSSARLERY LQLCAEQNMQ VVVPSTPAQV YHMIRRQVVR PMRRPLIVMS
PKSLLRHPLC TSTIEDLADG TFQSAIPEVD DLDPSKVKRV VFCSGKVYFD LLEQRRNNEQ
DDVAIVRIEQ LYPFPMEEVQ TAIAQYTNVE DFVWCQEEPQ NQGAWYCSQH NFRAAIPAGA
DLKYAGRPAS ASPAVGYMSV HLKQQKALVE DALNVNSKTS N
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