Gene VEA_004108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004108 
Symbol 
ID8557848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2772835 
End bp2773620 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID646407210 
Productzinc ABC transporter permease protein ZnuB 
Protein accessionYP_003286733 
Protein GI262394879 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGT TTCTTCTACC TTCTATTCTT GCTGGTATTG GCATCGCGAT CATTGCAGGT 
CCTCTTGGGT CATTCGTCGT TTGGCGCAAA ATGGCTTACT TCGGTGATAC CCTGGCACAT
GCTTCATTGA TGGGTTTGGC ATTAGGCTTT CTGCTCAACG TGAACCTTTA TCTTGCACTA
CTCGTTTGCT GTTTAGCACT CGCCGTATTG CTCGTGACAT TGCAGAAACA ACAACTGGTC
GCAACCGATA CGCTTCTGGG TATACTCGCC CATAGCGCAT TATCTGTTGG TCTAGTTTCT
GTTAGTTTCT TGGATAATGT CCGTGTAGAT CTGATGAGTT ACTTGTTCGG TGACTTACTC
GCAGTATCTC CGCAAGATCT GATGTTCATT TACGCAGGTG CCGCTGCTGT TAGTGTGTGT
CTTTACGTTT TTTGGCGACC TTTATTGTCG AGCACAGTTA GTGAAGAGCT TGCTGCCGTC
GAGGGCGTCA ATACAGACTT GGTTAGATTG GTGTTAATGC TTATGGTAGG TGTTGTGATT
GCCGTAGGAA TGAAGTTTGT TGGGGCACTT ATCATGACTT CTTTGCTGAT CATCCCAGCA
GCAACAGCAC GTAAGATCTC TTCATCACCA GAGCAAATGG CACTGTTCGC ATCTATTATT
GGCTCTGTGG CAGTACTGAT GGGGCTTAGC CTATCATGGC ACTTCGATAC GCCGGCTGGC
CCATCAGTAG TAATCAGCGC AACATCTCTG TTTATGCTTA GCCAATTTAT TCGCCAAAAA
TCGTAA
 
Protein sequence
MIEFLLPSIL AGIGIAIIAG PLGSFVVWRK MAYFGDTLAH ASLMGLALGF LLNVNLYLAL 
LVCCLALAVL LVTLQKQQLV ATDTLLGILA HSALSVGLVS VSFLDNVRVD LMSYLFGDLL
AVSPQDLMFI YAGAAAVSVC LYVFWRPLLS STVSEELAAV EGVNTDLVRL VLMLMVGVVI
AVGMKFVGAL IMTSLLIIPA ATARKISSSP EQMALFASII GSVAVLMGLS LSWHFDTPAG
PSVVISATSL FMLSQFIRQK S