| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003991 |
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| Symbol | |
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| ID | 8557727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2637358 |
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| End bp | 2638065 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407089 |
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| Product | lipoprotein releasing system ATP-binding protein LolD |
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| Protein accession | YP_003286616 |
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| Protein GI | 262394762 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC TATTAGAATG TCGTGATATT CGTAAAGTCT ACCGAGAGGG TTCGTTAGAT
ACGGAAGTGT TGAAAGGCGT AAGTTTCGAT ATCGATAAAG GGGAGCTGGT TTCTATTGTT
GGCTCTTCTG GTTCTGGAAA AAGTACCTTA TTGCATATTT TAGGGGCGTT AGATGACGCA
ACTCATGGTG AAGTTGATTT TCTAGGGCAA AACCTATCGG CTTTAAGTTC GAATAAACAG
GCGGCTTTAC GCAACAAGCA CCTTGGTTTT GTATACCAGT TCCATCACTT GTTAGCTGAT
TTTACTGCGC TTGAAAACGT GGCGATGCCA CTGATGATTG GCGGCGCTAA AGTAGCGGAT
GCAAAACAGG CGGCTAAAGC GTTGTTAGAT AAAGTTGGTT TGAGTCATCG GATGCAACAT
AGACCCTCCG AGTTATCGGG CGGTGAGCGT CAGCGTGTTG CGATTGCGCG TGCATTGGTG
AATAAACCTG ATCTGGTCTT GGCCGATGAA CCTACGGGGA ACTTAGATCA CAATACGGCA
CTGTCTATCT ATGATTTGAT GCGCGAGCTC AATAAAGAGT CAAACATTGC ATTTTTGGTT
GTCACGCATG ACAAAGAGCT GGCAGCGAAA ATGGATCGTC AAATGCACAT GCAAGATGGT
TTGCTCGTGG ATCGTTTTGT GACTGATACT GCGTTTTCGG AGGGCTAA
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| Protein sequence | MNKLLECRDI RKVYREGSLD TEVLKGVSFD IDKGELVSIV GSSGSGKSTL LHILGALDDA
THGEVDFLGQ NLSALSSNKQ AALRNKHLGF VYQFHHLLAD FTALENVAMP LMIGGAKVAD
AKQAAKALLD KVGLSHRMQH RPSELSGGER QRVAIARALV NKPDLVLADE PTGNLDHNTA
LSIYDLMREL NKESNIAFLV VTHDKELAAK MDRQMHMQDG LLVDRFVTDT AFSEG
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