Gene VEA_003989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003989 
Symbol 
ID8557725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2635453 
End bp2635962 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID646407087 
Producthypothetical protein 
Protein accessionYP_003286614 
Protein GI262394760 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAGAA AGCTGATAAA ACGCTTCATG CCAGATCATG AATTGATCAA ACGCCAAAAA 
GCATTGAAGG TCTTCGGCAA TGTGTTGTAC AACCCGAACT TGTGGTGTTT AAATCGTCGC
TCGGCGTCTG GGGCTTTTGC TGTCGGGTTA TTTATGGCAT TTGTTCCGCT ACCAAGCCAA
ATGATCATGG CTGCAGGTTT GGCAATCATG CTTGGCGTCA ATTTACCTCT CTCCGTCGCT
TTGGTATGGA TAAGCAACCC CATCACCATG CCTGTGTTAT TTTATTTTGC GTATAAGCTT
GGCGCTTTAG TGATGCATGT TCCTCCGCAA CCTTTCCACT TTGAACTTTC GTGGGAATTC
ATCATGCAAC AGATGAGCAC TATTGGCCCT CCATTCTTAT TAGGCTGTGC TATCTGTGGT
GTCATATCCG CGATTATTGG CTACTTCGGC ATTAGAGGAC TTTGGCGCTA CTCAGTGGTT
CGGAGCTGGC AAAAACGCAA AATAAGATAA
 
Protein sequence
MPRKLIKRFM PDHELIKRQK ALKVFGNVLY NPNLWCLNRR SASGAFAVGL FMAFVPLPSQ 
MIMAAGLAIM LGVNLPLSVA LVWISNPITM PVLFYFAYKL GALVMHVPPQ PFHFELSWEF
IMQQMSTIGP PFLLGCAICG VISAIIGYFG IRGLWRYSVV RSWQKRKIR