| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003962 |
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| Symbol | |
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| ID | 8557698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2602095 |
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| End bp | 2603126 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407060 |
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| Product | outer membrane protein OmpT |
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| Protein accession | YP_003286587 |
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| Protein GI | 262394733 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTCTATTAGC ACTAGCTGTA GTTGCGTCTG CAACTTCAGT GAACGCAGCT
GAAGTATTCA AATCTGAAGA AGGTTCTGTA GATTTCTACG GTCAGCTACG TCCAACTCTT
CTATTCCTAG ACAGCACAGA CCACACTGCA GAGCTAAACA CTAGCTCTTC TCGTATGGGT
GTAAATGGTG TTTACGTTGT AAACGACAAC CTAAAAGTTC TAGGTGAAGT TGAAATCGGT
GTTGCTCTAG GTGACAACTA CGGTGCAGGT GCTGATTCAA GCGAGCGTAC TGATGACTCA
GTATACGTAC GCCGTCACAT CTTTGGCTTC GACATGGGCG ATATGGGTAC ACTTCGTTTT
GGTAAAGAAG GTACTTGGGC TGATGACATC TACGGAGCTG ATTACTCATA CTTCTTCGGT
GGTTCTGCAC TTCTTTACGG ACACGCGTGG AACAACTCTT CTCAAATTAA ATACGCTTAC
GAAAATGACG CATTCTGGCT AAAAGCTGGT TACGCGCTAG GTGAGAAAGA TCAAAACGAA
GAAATCCGCG AAGTATTCGT AGGTAAGTCT TTCAATGACC TATCTGTACA CGCTGGCGTT
CTTTCTTCTG AGAACAAGAT TGCTTCTAAA GGTAACAACA CTGAGAACCT ATCTTTCGAA
GTAACTGCTG AATACGCTCT AGATGAGCAC ACTCTAGGTG CTACGTACTA CTACAACGAA
AATGAAGACA AAGCAGCTAA CGAGACTATC GATTCTCACG GTATCTCTCT AGCAGGCATG
TTCGCTGTAG CTCCTAAAAC AACACTTTAC TCTGGCTACG AGCTAGTAAT GTCATCTTCT
GACAAATCTG GCAAGAAAGA TGGCGACCAA TCTAAGTTTT ACGCTGGCGT TGAATACAAG
TTCTCTAAAT GGGCTCGCGT ATTCGCAGAA GCGGGTTACA ATTTTGATGG TGATAAGCTA
GAAGCTGGTA AAACAACTGC AGAAACTGAT TCTAAAACTG ACTTCGGTGT TGGTGCACGT
TTCTACTGGT AA
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| Protein sequence | MKKTLLALAV VASATSVNAA EVFKSEEGSV DFYGQLRPTL LFLDSTDHTA ELNTSSSRMG
VNGVYVVNDN LKVLGEVEIG VALGDNYGAG ADSSERTDDS VYVRRHIFGF DMGDMGTLRF
GKEGTWADDI YGADYSYFFG GSALLYGHAW NNSSQIKYAY ENDAFWLKAG YALGEKDQNE
EIREVFVGKS FNDLSVHAGV LSSENKIASK GNNTENLSFE VTAEYALDEH TLGATYYYNE
NEDKAANETI DSHGISLAGM FAVAPKTTLY SGYELVMSSS DKSGKKDGDQ SKFYAGVEYK
FSKWARVFAE AGYNFDGDKL EAGKTTAETD SKTDFGVGAR FYW
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