| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003956 |
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| Symbol | |
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| ID | 8557692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2594268 |
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| End bp | 2596535 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407054 |
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| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
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| Protein accession | YP_003286581 |
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| Protein GI | 262394727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0928294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATA AAGAACTAGA GTCAAGCCTT AACGGTGCAT TTGCTCGGGC GCGAGATAAA
CGCCACGAGT TTATGACTGT CGAACACCTC CTACTTGCAT TATTGGAAAA TGATGCAGCT
AAGGAAGCCC TTTTAGCTTG TAAAGCGGAT CTTGACGCTT TACGTAACGA ACTCGATATA
TTCATCGATC AAACTACGCC TCTTATCCCA GACAGTGATG AGACGCGTGA AACCCAGCCG
ACTTTGAGTT TTCAACGTGT GCTACAACGC GCCGTCTTTC ATGTACAGTC GTCTGGCCGC
AACGAAGTAA CAGGTGCAAA CGTGCTTGTG GCGATCTTCA GTGAGCAAGA GTCGCATGCC
GCCTACCTAC TGAAGAAAAA CGACATCTCC CGATTAGATA TTGTTAACTT TATCTCCCAT
GGTATTACTA AAGCGTCAGG TGCAAGCGAA GACCCATCAT CAGATTCGTT CAGTTCAGAG
AGTGTCGAAG AGCCGAATTC TGAAGAACGT TTGGAAAGCT TTGCGACTAA CCTTAATCAG
GTCGCTAAAG ATGGCAATAT CGATCCACTG ATTGGTCGCG ATAAAGAGCT AGAGCGCACT
ATTCAAGTAC TTTGCCGCCG CCGCAAGAAT AACCCATTAT TAGTGGGTGA AGCCGGGGTA
GGTAAAACAG CCATCGCAGA AGGTCTTGCT TGGCGAATTG TAGAAGGGCA GGTCCCGGAA
GTTATTCAAA ACAGCGTGAT TTACTCATTG GATATTGGTT CTCTATTGGC TGGTACTAAG
TACCGTGGTG ATTTTGAAAA ACGCTTCAAG GCGATTTTGA AACAGCTTGA AAAAGAAGAA
GATGCAATTT TGTTCATCGA TGAGATACAC ACAATCATCG GTGCGGGTGC GGCTTCTGGT
GGTCAAGTTG ATGCCGCAAA CCTTATCAAA CCTCTACTAA GTAGCGGTAA GTTGCGTTGT
ATCGGCTCGA CTACATACCA AGAATACAGC AACATTTTCG AGAAAGAGCG TGCGTTGTCC
CGTCGCTTCC AAAAGATTGA CGTTGTAGAA CCTTCTCTGG ATGACACAAC TAAAATCTTG
ATGGGCTTGA AGCCGAAGTA CGAAGCACAT CATGAAGTAC GTTACACCAA TAAAGCACTG
CGTGCCGCGG TAGAACTTTC GGCGAAATAC ATCAATGAAC GTCATTTACC AGATAAAGCC
ATTGATGTCA TTGATGAAGC TGGCGCTCGC AGTCGTCTTG CTCCTGCAAG CCGCCGTAAG
AAAACGGTTG GTGTTGCCGA TATCGAAGCG ATGGTTGCCA AGATGGCACG AATCCCAGAG
AAGTCGGTTT CTTCTTCAGA TAAAGACATC TTGAAGAACC TAGATAGCAA GATGAAGATG
TTGGTATTTG GTCAAGATAA TGCGATTGAT GCATTATCCG AAGCGATCAA GCTGACACGT
GCAGGTTTGG GCGTGGATAA CAAACCAGTT GGTTCATTCT TGTTTGCTGG CCCTACTGGG
GTGGGTAAAA CAGAGGTGAC GGTGCAGCTA TCTAAGCTTC TAGGGATCGA GCTACTTCGT
TTTGATATGT CGGAATATGG TGAGCGTCAC TCCGTGAGTC GCTTAATTGG TGCGCCTCCT
GGTTATGTCG GTTACGACCA AGGTGGTTTG CTGACAGACG CTGTTATCAA GCACCCACAT
TCAGTCGTAT TACTCGATGA GATTGAGAAA GCGCATCCAG ATATCTTTAA TTTGCTATTG
CAAGTGATGG ATAATGGTAC GCTAACGGAC AACAACGGTC GTAAAGCAGA CTTCCGTAAT
GTCATCCTCG TTATGACAAC CAACGCGGGT GTGGCTGAAA CTGAGAAGAA ATCAATTGGT
TTGATTCAGC AAGACAACAG TCACGATGCG ATGGCGGAAA TTAAGAAGGT GTTCACTCCT
GAGTTCCGTA ACCGTCTTGA TAACATCATC TGGTTTAACA GCCTTGATGA AAGCGTTATC
CATCAAGTTG TTGATAAGTT TATTGTTGAA CTGCAGGTGC AACTTGATGC TCGTGGCGTA
TCAATGGAGG TATCGCAAGA TGCACGCCAT TGGTTAGCGA ATAAAGGTTA TGATAAGGCG
ATGGGTGCTC GCCCAATGGG ACGCGTTATC CAAGAGCAAC TTAAGAAACC TTTGGCTAAT
GAATTGTTGT TTGGCTCTCT AGTCGACGGC GGCACTGTGA AAGTAACGCT AGTGAATGAC
ACACTTAAAT TTGAATATTT GAGTGAGAAA GAGGCAGCGA TGCATTAA
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| Protein sequence | MLNKELESSL NGAFARARDK RHEFMTVEHL LLALLENDAA KEALLACKAD LDALRNELDI
FIDQTTPLIP DSDETRETQP TLSFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESHA
AYLLKKNDIS RLDIVNFISH GITKASGASE DPSSDSFSSE SVEEPNSEER LESFATNLNQ
VAKDGNIDPL IGRDKELERT IQVLCRRRKN NPLLVGEAGV GKTAIAEGLA WRIVEGQVPE
VIQNSVIYSL DIGSLLAGTK YRGDFEKRFK AILKQLEKEE DAILFIDEIH TIIGAGAASG
GQVDAANLIK PLLSSGKLRC IGSTTYQEYS NIFEKERALS RRFQKIDVVE PSLDDTTKIL
MGLKPKYEAH HEVRYTNKAL RAAVELSAKY INERHLPDKA IDVIDEAGAR SRLAPASRRK
KTVGVADIEA MVAKMARIPE KSVSSSDKDI LKNLDSKMKM LVFGQDNAID ALSEAIKLTR
AGLGVDNKPV GSFLFAGPTG VGKTEVTVQL SKLLGIELLR FDMSEYGERH SVSRLIGAPP
GYVGYDQGGL LTDAVIKHPH SVVLLDEIEK AHPDIFNLLL QVMDNGTLTD NNGRKADFRN
VILVMTTNAG VAETEKKSIG LIQQDNSHDA MAEIKKVFTP EFRNRLDNII WFNSLDESVI
HQVVDKFIVE LQVQLDARGV SMEVSQDARH WLANKGYDKA MGARPMGRVI QEQLKKPLAN
ELLFGSLVDG GTVKVTLVND TLKFEYLSEK EAAMH
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